Protein–RNA interactions for Protein: K7ER74

APOC4-APOC2, APOC4-APOC2 readthrough (NMD candidate), humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-APOC2K7ER74 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APOC4-APOC2K7ER74 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
APOC4-APOC2K7ER74 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APOC4-APOC2K7ER74 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APOC4-APOC2K7ER74 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
APOC4-APOC2K7ER74 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.68■□□□□ 0.9
APOC4-APOC2K7ER74 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
APOC4-APOC2K7ER74 OR10C1-204ENST00000622521 1039 ntBASIC20.68■□□□□ 0.9
APOC4-APOC2K7ER74 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.68■□□□□ 0.9
APOC4-APOC2K7ER74 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APOC4-APOC2K7ER74 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
APOC4-APOC2K7ER74 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.68■□□□□ 0.9
APOC4-APOC2K7ER74 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.68■□□□□ 0.9
APOC4-APOC2K7ER74 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APOC4-APOC2K7ER74 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOC4-APOC2K7ER74 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.67■□□□□ 0.9
APOC4-APOC2K7ER74 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOC4-APOC2K7ER74 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.67■□□□□ 0.9
APOC4-APOC2K7ER74 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.67■□□□□ 0.9
APOC4-APOC2K7ER74 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.67■□□□□ 0.9
APOC4-APOC2K7ER74 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APOC4-APOC2K7ER74 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.67■□□□□ 0.9
APOC4-APOC2K7ER74 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.67■□□□□ 0.9
APOC4-APOC2K7ER74 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
APOC4-APOC2K7ER74 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOC4-APOC2K7ER74 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
APOC4-APOC2K7ER74 KRT8P17-201ENST00000453110 1448 ntBASIC20.67■□□□□ 0.9
APOC4-APOC2K7ER74 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
APOC4-APOC2K7ER74 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APOC4-APOC2K7ER74 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOC4-APOC2K7ER74 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOC4-APOC2K7ER74 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.67■□□□□ 0.9
APOC4-APOC2K7ER74 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 AC010980.2-201ENST00000587099 1412 ntBASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
APOC4-APOC2K7ER74 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
APOC4-APOC2K7ER74 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APOC4-APOC2K7ER74 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.65■□□□□ 0.9
APOC4-APOC2K7ER74 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
APOC4-APOC2K7ER74 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.65■□□□□ 0.9
APOC4-APOC2K7ER74 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
APOC4-APOC2K7ER74 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APOC4-APOC2K7ER74 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APOC4-APOC2K7ER74 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.65■□□□□ 0.9
APOC4-APOC2K7ER74 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
APOC4-APOC2K7ER74 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
APOC4-APOC2K7ER74 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APOC4-APOC2K7ER74 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APOC4-APOC2K7ER74 AL355472.2-201ENST00000422958 438 ntBASIC20.65■□□□□ 0.9
APOC4-APOC2K7ER74 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.65■□□□□ 0.9
APOC4-APOC2K7ER74 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.65■□□□□ 0.9
APOC4-APOC2K7ER74 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.65■□□□□ 0.9
APOC4-APOC2K7ER74 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APOC4-APOC2K7ER74 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APOC4-APOC2K7ER74 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APOC4-APOC2K7ER74 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APOC4-APOC2K7ER74 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APOC4-APOC2K7ER74 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.65■□□□□ 0.9
APOC4-APOC2K7ER74 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.65■□□□□ 0.9
APOC4-APOC2K7ER74 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.65■□□□□ 0.9
APOC4-APOC2K7ER74 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APOC4-APOC2K7ER74 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
APOC4-APOC2K7ER74 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
APOC4-APOC2K7ER74 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
APOC4-APOC2K7ER74 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
APOC4-APOC2K7ER74 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
APOC4-APOC2K7ER74 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
APOC4-APOC2K7ER74 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
APOC4-APOC2K7ER74 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
APOC4-APOC2K7ER74 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
APOC4-APOC2K7ER74 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms