Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPA3F8WFD2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NPIPA3F8WFD2 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
NPIPA3F8WFD2 RN7SL471P-201ENST00000580476 299 ntBASIC18.28■□□□□ 0.52
NPIPA3F8WFD2 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.28■□□□□ 0.52
NPIPA3F8WFD2 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPA3F8WFD2 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPA3F8WFD2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPA3F8WFD2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.28■□□□□ 0.52
NPIPA3F8WFD2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.28■□□□□ 0.52
NPIPA3F8WFD2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPA3F8WFD2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPA3F8WFD2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPA3F8WFD2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.28■□□□□ 0.52
NPIPA3F8WFD2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPA3F8WFD2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
NPIPA3F8WFD2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPIPA3F8WFD2 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.27■□□□□ 0.52
NPIPA3F8WFD2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPIPA3F8WFD2 FP700111.2-201ENST00000619190 1892 ntBASIC18.27■□□□□ 0.52
NPIPA3F8WFD2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPIPA3F8WFD2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPIPA3F8WFD2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPIPA3F8WFD2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
NPIPA3F8WFD2 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NPIPA3F8WFD2 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.27■□□□□ 0.52
NPIPA3F8WFD2 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.27■□□□□ 0.52
NPIPA3F8WFD2 AC006557.6-201ENST00000623071 864 ntBASIC18.27■□□□□ 0.52
NPIPA3F8WFD2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPIPA3F8WFD2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPIPA3F8WFD2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.27■□□□□ 0.52
NPIPA3F8WFD2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NPIPA3F8WFD2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
NPIPA3F8WFD2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NPIPA3F8WFD2 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
NPIPA3F8WFD2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NPIPA3F8WFD2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NPIPA3F8WFD2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPA3F8WFD2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.26■□□□□ 0.51
NPIPA3F8WFD2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.26■□□□□ 0.51
NPIPA3F8WFD2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPA3F8WFD2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
NPIPA3F8WFD2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.26■□□□□ 0.51
NPIPA3F8WFD2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.26■□□□□ 0.51
NPIPA3F8WFD2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPA3F8WFD2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPA3F8WFD2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.26■□□□□ 0.51
NPIPA3F8WFD2 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPA3F8WFD2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPA3F8WFD2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.26■□□□□ 0.51
NPIPA3F8WFD2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.26■□□□□ 0.51
NPIPA3F8WFD2 AC008550.1-201ENST00000511500 884 ntBASIC18.26■□□□□ 0.51
NPIPA3F8WFD2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.26■□□□□ 0.51
NPIPA3F8WFD2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.26■□□□□ 0.51
NPIPA3F8WFD2 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.26■□□□□ 0.51
NPIPA3F8WFD2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPA3F8WFD2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPA3F8WFD2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPA3F8WFD2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPA3F8WFD2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPA3F8WFD2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPA3F8WFD2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPA3F8WFD2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPA3F8WFD2 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPA3F8WFD2 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.25■□□□□ 0.51
NPIPA3F8WFD2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPA3F8WFD2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.25■□□□□ 0.51
NPIPA3F8WFD2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPA3F8WFD2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPA3F8WFD2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.25■□□□□ 0.51
NPIPA3F8WFD2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPA3F8WFD2 AL390719.1-204ENST00000412397 1219 ntBASIC18.25■□□□□ 0.51
NPIPA3F8WFD2 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.25■□□□□ 0.51
NPIPA3F8WFD2 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
NPIPA3F8WFD2 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPA3F8WFD2 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.25■□□□□ 0.51
NPIPA3F8WFD2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.25■□□□□ 0.51
NPIPA3F8WFD2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.25■□□□□ 0.51
NPIPA3F8WFD2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPA3F8WFD2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPA3F8WFD2 AC007225.1-201ENST00000566331 1836 ntBASIC18.25■□□□□ 0.51
NPIPA3F8WFD2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.25■□□□□ 0.51
NPIPA3F8WFD2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.25■□□□□ 0.51
NPIPA3F8WFD2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPA3F8WFD2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
NPIPA3F8WFD2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPA3F8WFD2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.24■□□□□ 0.51
NPIPA3F8WFD2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.24■□□□□ 0.51
NPIPA3F8WFD2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NPIPA3F8WFD2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NPIPA3F8WFD2 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NPIPA3F8WFD2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NPIPA3F8WFD2 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
NPIPA3F8WFD2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NPIPA3F8WFD2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NPIPA3F8WFD2 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.24■□□□□ 0.51
NPIPA3F8WFD2 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
NPIPA3F8WFD2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
NPIPA3F8WFD2 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NPIPA3F8WFD2 AL596275.1-201ENST00000423464 877 ntBASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms