Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.17■□□□□ 0.18
SRRM4A7MD48 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SRRM4A7MD48 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.17■□□□□ 0.18
SRRM4A7MD48 AC231657.2-201ENST00000624556 255 ntBASIC16.17■□□□□ 0.18
SRRM4A7MD48 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRRM4A7MD48 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SRRM4A7MD48 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.17■□□□□ 0.18
SRRM4A7MD48 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SRRM4A7MD48 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRRM4A7MD48 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SRRM4A7MD48 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
SRRM4A7MD48 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRRM4A7MD48 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SRRM4A7MD48 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SRRM4A7MD48 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
SRRM4A7MD48 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM4A7MD48 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM4A7MD48 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.16■□□□□ 0.18
SRRM4A7MD48 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM4A7MD48 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM4A7MD48 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM4A7MD48 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM4A7MD48 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM4A7MD48 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.16■□□□□ 0.18
SRRM4A7MD48 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.16■□□□□ 0.18
SRRM4A7MD48 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM4A7MD48 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.16■□□□□ 0.18
SRRM4A7MD48 KRT18P68-201ENST00000392293 1000 ntBASIC16.16■□□□□ 0.18
SRRM4A7MD48 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM4A7MD48 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.16■□□□□ 0.18
SRRM4A7MD48 AC007322.1-201ENST00000426983 750 ntBASIC16.16■□□□□ 0.18
SRRM4A7MD48 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
SRRM4A7MD48 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM4A7MD48 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.16■□□□□ 0.18
SRRM4A7MD48 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM4A7MD48 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM4A7MD48 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM4A7MD48 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM4A7MD48 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM4A7MD48 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM4A7MD48 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRRM4A7MD48 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM4A7MD48 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM4A7MD48 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM4A7MD48 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM4A7MD48 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM4A7MD48 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.15■□□□□ 0.18
SRRM4A7MD48 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM4A7MD48 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM4A7MD48 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM4A7MD48 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM4A7MD48 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SRRM4A7MD48 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SRRM4A7MD48 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM4A7MD48 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM4A7MD48 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM4A7MD48 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM4A7MD48 AC004911.1-201ENST00000416316 871 ntBASIC16.15■□□□□ 0.18
SRRM4A7MD48 AL355472.2-201ENST00000422958 438 ntBASIC16.15■□□□□ 0.18
SRRM4A7MD48 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.15■□□□□ 0.18
SRRM4A7MD48 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.15■□□□□ 0.18
SRRM4A7MD48 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.15■□□□□ 0.18
SRRM4A7MD48 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SRRM4A7MD48 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.15■□□□□ 0.18
SRRM4A7MD48 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.15■□□□□ 0.18
SRRM4A7MD48 AC092437.1-201ENST00000624794 1048 ntBASIC16.15■□□□□ 0.18
SRRM4A7MD48 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SRRM4A7MD48 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM4A7MD48 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM4A7MD48 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM4A7MD48 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.15■□□□□ 0.18
SRRM4A7MD48 PTBP1P-201ENST00000554374 1601 ntBASIC16.15■□□□□ 0.18
SRRM4A7MD48 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM4A7MD48 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM4A7MD48 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRRM4A7MD48 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SRRM4A7MD48 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRRM4A7MD48 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRRM4A7MD48 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.14■□□□□ 0.17
SRRM4A7MD48 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRRM4A7MD48 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.14■□□□□ 0.17
SRRM4A7MD48 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRRM4A7MD48 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRRM4A7MD48 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SRRM4A7MD48 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.14■□□□□ 0.17
SRRM4A7MD48 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SRRM4A7MD48 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.14■□□□□ 0.17
SRRM4A7MD48 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SRRM4A7MD48 CYP2T3P-201ENST00000601990 817 ntBASIC16.14■□□□□ 0.17
SRRM4A7MD48 AC069236.1-201ENST00000604339 616 ntBASIC16.14■□□□□ 0.17
SRRM4A7MD48 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.14■□□□□ 0.17
SRRM4A7MD48 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.14■□□□□ 0.17
SRRM4A7MD48 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
SRRM4A7MD48 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRRM4A7MD48 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.14■□□□□ 0.17
SRRM4A7MD48 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRRM4A7MD48 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SRRM4A7MD48 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.14■□□□□ 0.17
SRRM4A7MD48 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.14■□□□□ 0.17
SRRM4A7MD48 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms