Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 DUX4L16-201ENST00000555130 1264 ntBASIC16.05■□□□□ 0.16
CGB1A6NKQ9 AL162412.1-201ENST00000567129 965 ntBASIC16.05■□□□□ 0.16
CGB1A6NKQ9 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 AC011767.1-201ENST00000617410 1153 ntBASIC16.05■□□□□ 0.16
CGB1A6NKQ9 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CGB1A6NKQ9 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CGB1A6NKQ9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CGB1A6NKQ9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CGB1A6NKQ9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
CGB1A6NKQ9 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
CGB1A6NKQ9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.04■□□□□ 0.16
CGB1A6NKQ9 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CGB1A6NKQ9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CGB1A6NKQ9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CGB1A6NKQ9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CGB1A6NKQ9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.04■□□□□ 0.16
CGB1A6NKQ9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.04■□□□□ 0.16
CGB1A6NKQ9 AC006015.1-201ENST00000429970 570 ntBASIC16.04■□□□□ 0.16
CGB1A6NKQ9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.04■□□□□ 0.16
CGB1A6NKQ9 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.04■□□□□ 0.16
CGB1A6NKQ9 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CGB1A6NKQ9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.04■□□□□ 0.16
CGB1A6NKQ9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CGB1A6NKQ9 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CGB1A6NKQ9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CGB1A6NKQ9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CGB1A6NKQ9 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.04■□□□□ 0.16
CGB1A6NKQ9 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.03■□□□□ 0.16
CGB1A6NKQ9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CGB1A6NKQ9 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.03■□□□□ 0.16
CGB1A6NKQ9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CGB1A6NKQ9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CGB1A6NKQ9 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CGB1A6NKQ9 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.03■□□□□ 0.16
CGB1A6NKQ9 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.03■□□□□ 0.16
CGB1A6NKQ9 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.03■□□□□ 0.16
CGB1A6NKQ9 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CGB1A6NKQ9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CGB1A6NKQ9 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.03■□□□□ 0.16
CGB1A6NKQ9 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.03■□□□□ 0.16
CGB1A6NKQ9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CGB1A6NKQ9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CGB1A6NKQ9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CGB1A6NKQ9 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CGB1A6NKQ9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.03■□□□□ 0.16
CGB1A6NKQ9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CGB1A6NKQ9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CGB1A6NKQ9 AC125437.2-201ENST00000625180 2167 ntBASIC16.03■□□□□ 0.16
CGB1A6NKQ9 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CGB1A6NKQ9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CGB1A6NKQ9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.03■□□□□ 0.16
CGB1A6NKQ9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CGB1A6NKQ9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CGB1A6NKQ9 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CGB1A6NKQ9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.02■□□□□ 0.16
CGB1A6NKQ9 AC068338.2-201ENST00000563278 1430 ntBASIC16.02■□□□□ 0.16
CGB1A6NKQ9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CGB1A6NKQ9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CGB1A6NKQ9 AL691432.2-201ENST00000607222 2038 ntBASIC16.02■□□□□ 0.16
CGB1A6NKQ9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CGB1A6NKQ9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CGB1A6NKQ9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.02■□□□□ 0.16
CGB1A6NKQ9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CGB1A6NKQ9 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CGB1A6NKQ9 BX119927.1-201ENST00000636596 1552 ntBASIC16.02■□□□□ 0.16
CGB1A6NKQ9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CGB1A6NKQ9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
CGB1A6NKQ9 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CGB1A6NKQ9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CGB1A6NKQ9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CGB1A6NKQ9 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CGB1A6NKQ9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CGB1A6NKQ9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CGB1A6NKQ9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CGB1A6NKQ9 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.02■□□□□ 0.16
CGB1A6NKQ9 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.02■□□□□ 0.16
CGB1A6NKQ9 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
CGB1A6NKQ9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.02■□□□□ 0.16
CGB1A6NKQ9 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CGB1A6NKQ9 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CGB1A6NKQ9 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CGB1A6NKQ9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CGB1A6NKQ9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CGB1A6NKQ9 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms