Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF222A6NCQ9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF222A6NCQ9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RNF222A6NCQ9 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF222A6NCQ9 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF222A6NCQ9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF222A6NCQ9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF222A6NCQ9 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF222A6NCQ9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF222A6NCQ9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF222A6NCQ9 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF222A6NCQ9 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF222A6NCQ9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF222A6NCQ9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF222A6NCQ9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF222A6NCQ9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF222A6NCQ9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF222A6NCQ9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF222A6NCQ9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF222A6NCQ9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF222A6NCQ9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF222A6NCQ9 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF222A6NCQ9 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF222A6NCQ9 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF222A6NCQ9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RNF222A6NCQ9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF222A6NCQ9 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RNF222A6NCQ9 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF222A6NCQ9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RNF222A6NCQ9 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RNF222A6NCQ9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF222A6NCQ9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF222A6NCQ9 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF222A6NCQ9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RNF222A6NCQ9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF222A6NCQ9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF222A6NCQ9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF222A6NCQ9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RNF222A6NCQ9 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF222A6NCQ9 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RNF222A6NCQ9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF222A6NCQ9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF222A6NCQ9 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF222A6NCQ9 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RNF222A6NCQ9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF222A6NCQ9 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF222A6NCQ9 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RNF222A6NCQ9 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF222A6NCQ9 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF222A6NCQ9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF222A6NCQ9 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RNF222A6NCQ9 DPP3P2-201ENST00000416030 1696 ntBASIC16.3■□□□□ 0.2
RNF222A6NCQ9 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RNF222A6NCQ9 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF222A6NCQ9 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF222A6NCQ9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF222A6NCQ9 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF222A6NCQ9 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF222A6NCQ9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF222A6NCQ9 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF222A6NCQ9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF222A6NCQ9 AC004987.1-201ENST00000428627 508 ntBASIC16.3■□□□□ 0.2
RNF222A6NCQ9 ATP5G2P3-201ENST00000429083 425 ntBASIC16.3■□□□□ 0.2
RNF222A6NCQ9 BX664725.1-201ENST00000438252 379 ntBASIC16.3■□□□□ 0.2
RNF222A6NCQ9 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF222A6NCQ9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RNF222A6NCQ9 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RNF222A6NCQ9 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF222A6NCQ9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF222A6NCQ9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
RNF222A6NCQ9 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RNF222A6NCQ9 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF222A6NCQ9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RNF222A6NCQ9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF222A6NCQ9 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF222A6NCQ9 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RNF222A6NCQ9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
RNF222A6NCQ9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF222A6NCQ9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF222A6NCQ9 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF222A6NCQ9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF222A6NCQ9 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF222A6NCQ9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF222A6NCQ9 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF222A6NCQ9 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF222A6NCQ9 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF222A6NCQ9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RNF222A6NCQ9 NOC2LP2-201ENST00000407594 1944 ntBASIC16.29■□□□□ 0.2
RNF222A6NCQ9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF222A6NCQ9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF222A6NCQ9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF222A6NCQ9 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF222A6NCQ9 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF222A6NCQ9 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF222A6NCQ9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RNF222A6NCQ9 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF222A6NCQ9 AC099791.2-201ENST00000605725 427 ntBASIC16.29■□□□□ 0.2
RNF222A6NCQ9 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF222A6NCQ9 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF222A6NCQ9 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms