Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TRDV1A0A1B0GX56 KRT16P2-201ENST00000414673 1423 ntBASIC17.65■□□□□ 0.42
TRDV1A0A1B0GX56 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRDV1A0A1B0GX56 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRDV1A0A1B0GX56 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRDV1A0A1B0GX56 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRDV1A0A1B0GX56 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TRDV1A0A1B0GX56 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TRDV1A0A1B0GX56 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.65■□□□□ 0.42
TRDV1A0A1B0GX56 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRDV1A0A1B0GX56 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.65■□□□□ 0.42
TRDV1A0A1B0GX56 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.65■□□□□ 0.42
TRDV1A0A1B0GX56 AC026471.1-201ENST00000564629 3026 ntBASIC17.65■□□□□ 0.42
TRDV1A0A1B0GX56 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TRDV1A0A1B0GX56 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRDV1A0A1B0GX56 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRDV1A0A1B0GX56 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
TRDV1A0A1B0GX56 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRDV1A0A1B0GX56 LETM1P2-201ENST00000597330 2178 ntBASIC17.64■□□□□ 0.42
TRDV1A0A1B0GX56 LINC01465-201ENST00000408887 1940 ntBASIC17.64■□□□□ 0.42
TRDV1A0A1B0GX56 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
TRDV1A0A1B0GX56 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TRDV1A0A1B0GX56 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRDV1A0A1B0GX56 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.64■□□□□ 0.41
TRDV1A0A1B0GX56 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRDV1A0A1B0GX56 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRDV1A0A1B0GX56 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.64■□□□□ 0.41
TRDV1A0A1B0GX56 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.64■□□□□ 0.41
TRDV1A0A1B0GX56 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRDV1A0A1B0GX56 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRDV1A0A1B0GX56 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRDV1A0A1B0GX56 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TRDV1A0A1B0GX56 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRDV1A0A1B0GX56 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.64■□□□□ 0.41
TRDV1A0A1B0GX56 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRDV1A0A1B0GX56 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.64■□□□□ 0.41
TRDV1A0A1B0GX56 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRDV1A0A1B0GX56 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.64■□□□□ 0.41
TRDV1A0A1B0GX56 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRDV1A0A1B0GX56 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRDV1A0A1B0GX56 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.64■□□□□ 0.41
TRDV1A0A1B0GX56 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.64■□□□□ 0.41
TRDV1A0A1B0GX56 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRDV1A0A1B0GX56 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRDV1A0A1B0GX56 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRDV1A0A1B0GX56 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRDV1A0A1B0GX56 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRDV1A0A1B0GX56 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRDV1A0A1B0GX56 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRDV1A0A1B0GX56 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRDV1A0A1B0GX56 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRDV1A0A1B0GX56 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRDV1A0A1B0GX56 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRDV1A0A1B0GX56 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRDV1A0A1B0GX56 AL032819.2-201ENST00000624543 2162 ntBASIC17.62■□□□□ 0.41
TRDV1A0A1B0GX56 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRDV1A0A1B0GX56 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.62■□□□□ 0.41
TRDV1A0A1B0GX56 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRDV1A0A1B0GX56 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.62■□□□□ 0.41
TRDV1A0A1B0GX56 MIR4767-201ENST00000582827 78 ntBASIC17.62■□□□□ 0.41
TRDV1A0A1B0GX56 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.62■□□□□ 0.41
TRDV1A0A1B0GX56 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRDV1A0A1B0GX56 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRDV1A0A1B0GX56 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRDV1A0A1B0GX56 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
TRDV1A0A1B0GX56 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRDV1A0A1B0GX56 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.62■□□□□ 0.41
TRDV1A0A1B0GX56 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRDV1A0A1B0GX56 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.62■□□□□ 0.41
TRDV1A0A1B0GX56 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms