Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
RCL1Q9Y2P8 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 ARNTL2-201ENST00000261178 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 ZNF300P1-201ENST00000356555 1822 ntBASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 ZSCAN16-201ENST00000340487 1328 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 MSR1-203ENST00000355282 1167 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 OR11G2-201ENST00000357366 1038 ntBASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 ISY1-202ENST00000393292 988 ntTSL 5 BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 LYPLA2P3-201ENST00000417429 576 ntBASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 AL031282.1-204ENST00000418950 497 ntBASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 AL355516.1-201ENST00000422082 746 ntTSL 3 BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 FABP5P1-201ENST00000423401 411 ntBASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 AF127577.3-201ENST00000430391 781 ntTSL 2 BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 AC005040.1-201ENST00000437783 482 ntBASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 FABP5P2-201ENST00000439042 408 ntBASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 AL391987.3-201ENST00000441101 719 ntTSL 5 BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 SFTPA3P-201ENST00000446429 367 ntBASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 AL596188.1-201ENST00000452888 370 ntTSL 5 BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 LINC00945-201ENST00000453716 753 ntTSL 5 BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 AF186996.8-201ENST00000463158 907 ntBASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 AC026336.1-201ENST00000466577 351 ntBASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 RN7SL332P-201ENST00000482163 254 ntBASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 AL445187.1-201ENST00000502685 260 ntBASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 ELL2P2-201ENST00000515135 694 ntBASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 GSTZ1-216ENST00000556627 919 ntTSL 3 BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 AC012301.1-201ENST00000586391 581 ntTSL 2 BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 AC087289.3-203ENST00000587556 550 ntAPPRIS P5 TSL 4 BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 CGA-202ENST00000610310 615 ntTSL 3 BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 STARD13-AS-247ENST00000610879 779 ntTSL 5 BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 SMIM11B-201ENST00000612624 1021 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 Metazoa_SRP.120-201ENST00000614195 252 ntBASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 Metazoa_SRP.165-201ENST00000615681 260 ntBASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 AC245033.3-201ENST00000617986 224 ntBASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 CU638689.4-203ENST00000625185 785 ntTSL 5 BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 AQP4-AS1-206ENST00000628174 919 ntTSL 5 BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 AC073488.8-201ENST00000631952 757 ntBASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 CDY3P-201ENST00000454543 1618 ntBASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RCL1Q9Y2P8 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 AC011592.1-201ENST00000624647 3634 ntBASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 MFSD1P1-201ENST00000576210 1327 ntBASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 AC110716.2-201ENST00000563865 3945 ntBASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 LCN1-201ENST00000263598 776 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 PSG9-203ENST00000291752 1055 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 CEP41-203ENST00000343969 1087 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 TRAJ24-201ENST00000390513 63 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 AC111200.2-201ENST00000418877 505 ntBASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 AL355526.1-201ENST00000420347 215 ntTSL 5 BASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 AP001342.1-201ENST00000423389 525 ntBASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 NEFLP1-201ENST00000436364 984 ntBASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 LINC01865-202ENST00000436808 853 ntTSL 5 BASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 AC105942.1-202ENST00000438509 952 ntTSL 3 BASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 AL359711.1-201ENST00000441999 123 ntBASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 ENTPD1-AS1-206ENST00000449197 523 ntTSL 2 BASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 TSSK1A-201ENST00000450724 768 ntBASIC6.05□□□□□ -1.44
RCL1Q9Y2P8 AL592043.2-201ENST00000454146 743 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms