Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC007221.2-201ENST00000634367 948 ntTSL 5 BASIC6.51□□□□□ -1.37
SSX3Q99909 AP003175.1-201ENST00000641383 6658 ntBASIC6.51□□□□□ -1.37
SSX3Q99909 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSX3Q99909 GLYATL2-202ENST00000532258 1488 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSX3Q99909 MFSD8-243ENST00000641695 1455 ntBASIC6.51□□□□□ -1.37
SSX3Q99909 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSX3Q99909 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSX3Q99909 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SSX3Q99909 AL512662.1-201ENST00000624850 2251 ntBASIC6.51□□□□□ -1.37
SSX3Q99909 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC6.51□□□□□ -1.37
SSX3Q99909 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SSX3Q99909 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.51□□□□□ -1.37
SSX3Q99909 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.51□□□□□ -1.37
SSX3Q99909 PCDH18-205ENST00000511115 1331 ntTSL 2 BASIC6.5□□□□□ -1.37
SSX3Q99909 FHL1-230ENST00000630084 1335 ntTSL 2 BASIC6.5□□□□□ -1.37
SSX3Q99909 AL022334.1-201ENST00000417397 1726 ntBASIC6.5□□□□□ -1.37
SSX3Q99909 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSX3Q99909 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC6.5□□□□□ -1.37
SSX3Q99909 CTAGE3P-201ENST00000454280 2404 ntBASIC6.5□□□□□ -1.37
SSX3Q99909 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSX3Q99909 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSX3Q99909 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.5□□□□□ -1.37
SSX3Q99909 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSX3Q99909 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
SSX3Q99909 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSX3Q99909 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSX3Q99909 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSX3Q99909 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSX3Q99909 AC133644.1-201ENST00000398171 937 ntBASIC6.5□□□□□ -1.37
SSX3Q99909 AC006455.4-201ENST00000418297 528 ntTSL 4 BASIC6.5□□□□□ -1.37
SSX3Q99909 RPL36P18-201ENST00000419316 318 ntBASIC6.5□□□□□ -1.37
SSX3Q99909 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC6.5□□□□□ -1.37
SSX3Q99909 C2orf74-202ENST00000426997 879 ntAPPRIS P2 TSL 3 BASIC6.5□□□□□ -1.37
SSX3Q99909 AC097527.1-201ENST00000437031 530 ntBASIC6.5□□□□□ -1.37
SSX3Q99909 GRM8-206ENST00000444921 1251 ntTSL 3 BASIC6.5□□□□□ -1.37
SSX3Q99909 AC245047.6-201ENST00000445444 617 ntBASIC6.5□□□□□ -1.37
SSX3Q99909 AC073188.4-201ENST00000450077 528 ntTSL 4 BASIC6.5□□□□□ -1.37
SSX3Q99909 SSU72P8-201ENST00000473520 585 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SSX3Q99909 AC008638.2-201ENST00000503840 715 ntBASIC6.5□□□□□ -1.37
SSX3Q99909 NMNAT1P4-201ENST00000505598 840 ntBASIC6.5□□□□□ -1.37
SSX3Q99909 LINC02200-203ENST00000513687 541 ntTSL 3 BASIC6.5□□□□□ -1.37
SSX3Q99909 RNA5SP116-201ENST00000516132 98 ntBASIC6.5□□□□□ -1.37
SSX3Q99909 C14orf159-210ENST00000518665 959 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSX3Q99909 LINC01591-202ENST00000522279 1240 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSX3Q99909 ZNF345-205ENST00000526123 458 ntTSL 3 BASIC6.5□□□□□ -1.37
SSX3Q99909 KCTD21-AS1-204ENST00000528468 554 ntTSL 4 BASIC6.5□□□□□ -1.37
SSX3Q99909 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.5□□□□□ -1.37
SSX3Q99909 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC6.5□□□□□ -1.37
SSX3Q99909 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC6.5□□□□□ -1.37
SSX3Q99909 AC073167.1-201ENST00000559303 580 ntTSL 5 BASIC6.5□□□□□ -1.37
SSX3Q99909 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC6.5□□□□□ -1.37
SSX3Q99909 AC063923.2-201ENST00000562158 928 ntBASIC6.5□□□□□ -1.37
SSX3Q99909 AC009121.1-201ENST00000574681 1095 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSX3Q99909 MIR3689F-201ENST00000579617 66 ntBASIC6.5□□□□□ -1.37
SSX3Q99909 MIR3689C-201ENST00000581239 72 ntBASIC6.5□□□□□ -1.37
SSX3Q99909 LAMTOR5-AS1-205ENST00000587691 441 ntTSL 3 BASIC6.5□□□□□ -1.37
SSX3Q99909 TEX26-AS1-211ENST00000589840 865 ntTSL 5 BASIC6.5□□□□□ -1.37
SSX3Q99909 LINC00662-207ENST00000590677 883 ntTSL 5 BASIC6.5□□□□□ -1.37
SSX3Q99909 VDAC1P8-210ENST00000610068 1251 ntTSL 5 BASIC6.5□□□□□ -1.37
SSX3Q99909 AC069542.2-201ENST00000624816 216 ntBASIC6.5□□□□□ -1.37
SSX3Q99909 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC6.5□□□□□ -1.37
SSX3Q99909 RHOXF1P2-201ENST00000635431 502 ntBASIC6.5□□□□□ -1.37
SSX3Q99909 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSX3Q99909 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
SSX3Q99909 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSX3Q99909 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SSX3Q99909 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC6.5□□□□□ -1.37
SSX3Q99909 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.5□□□□□ -1.37
SSX3Q99909 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.5□□□□□ -1.37
SSX3Q99909 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
SSX3Q99909 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC6.5□□□□□ -1.37
SSX3Q99909 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SSX3Q99909 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.5□□□□□ -1.37
SSX3Q99909 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC6.49□□□□□ -1.37
SSX3Q99909 SCOC-AS1-201ENST00000512692 1987 ntTSL 2 BASIC6.49□□□□□ -1.37
SSX3Q99909 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSX3Q99909 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSX3Q99909 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SSX3Q99909 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SSX3Q99909 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SSX3Q99909 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC6.49□□□□□ -1.37
SSX3Q99909 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSX3Q99909 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSX3Q99909 AC107058.1-201ENST00000513297 1384 ntBASIC6.49□□□□□ -1.37
SSX3Q99909 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSX3Q99909 TRIM51HP-202ENST00000530412 1823 ntBASIC6.49□□□□□ -1.37
SSX3Q99909 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSX3Q99909 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSX3Q99909 MS4A2-201ENST00000278888 1152 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSX3Q99909 OR1G1-201ENST00000328890 998 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SSX3Q99909 SNORA71D-201ENST00000363484 134 ntBASIC6.49□□□□□ -1.37
SSX3Q99909 PDHA1-202ENST00000379804 709 ntTSL 2 BASIC6.49□□□□□ -1.37
SSX3Q99909 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSX3Q99909 ZNF816-ZNF321P-201ENST00000391777 1252 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
SSX3Q99909 LINC01066-201ENST00000415283 399 ntTSL 3 BASIC6.49□□□□□ -1.37
SSX3Q99909 ATP13A4-AS1-201ENST00000426459 795 ntTSL 3 BASIC6.49□□□□□ -1.37
SSX3Q99909 AC097358.1-201ENST00000438827 582 ntBASIC6.49□□□□□ -1.37
SSX3Q99909 LINC01015-204ENST00000445296 399 ntTSL 3 BASIC6.49□□□□□ -1.37
SSX3Q99909 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SSX3Q99909 AL135908.1-202ENST00000454135 562 ntTSL 2 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms