Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC009166.2-201ENST00000624410 2833 ntBASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC6.72□□□□□ -1.33
LINC00346Q8IVM7 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
LINC00346Q8IVM7 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
LINC00346Q8IVM7 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC6.71□□□□□ -1.33
LINC00346Q8IVM7 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
LINC00346Q8IVM7 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
LINC00346Q8IVM7 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
LINC00346Q8IVM7 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
LINC00346Q8IVM7 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
LINC00346Q8IVM7 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 SNORD46-201ENST00000364043 104 ntBASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 FARP1-202ENST00000376581 1021 ntTSL 2 BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 MAML3-201ENST00000398940 831 ntTSL 5 BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 IGKV1OR2-3-201ENST00000411475 288 ntBASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 RAC1P4-201ENST00000419413 579 ntBASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 OR7E36P-201ENST00000419933 954 ntBASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 RPE-205ENST00000429907 925 ntTSL 2 BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 AC245047.6-201ENST00000445444 617 ntBASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 ASPA-202ENST00000456349 1090 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 AC123768.1-202ENST00000460684 461 ntTSL 3 BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 AC005550.2-201ENST00000476382 318 ntBASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 AC087385.2-201ENST00000477729 498 ntBASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 NMNAT1P4-201ENST00000505598 840 ntBASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 AC108120.1-201ENST00000506543 991 ntBASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 AC022296.2-201ENST00000512424 202 ntBASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 RN7SKP105-201ENST00000517192 314 ntBASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 AP003122.2-201ENST00000527332 486 ntTSL 3 BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 AC114810.1-201ENST00000607415 473 ntBASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 MIR6751-201ENST00000610479 63 ntBASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 AC012488.1-201ENST00000611221 640 ntBASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 AC097641.3-201ENST00000613523 464 ntBASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 AL451054.1-201ENST00000621770 772 ntBASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 ZBTB20-AS5-203ENST00000628886 819 ntTSL 5 BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 UG0898H09-202ENST00000623646 7040 ntBASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 AC012213.2-201ENST00000562917 4597 ntBASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 OR7E11P-202ENST00000642027 1491 ntBASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 ZSCAN16-201ENST00000340487 1328 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 CADPS-220ENST00000613879 1804 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 AC123769.2-201ENST00000624332 5984 ntBASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 MELK-207ENST00000536860 2342 ntTSL 2 BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
LINC00346Q8IVM7 SAMMSON-222ENST00000641901 2727 ntBASIC6.7□□□□□ -1.34
LINC00346Q8IVM7 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LINC00346Q8IVM7 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC6.7□□□□□ -1.34
LINC00346Q8IVM7 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.7□□□□□ -1.34
LINC00346Q8IVM7 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.7□□□□□ -1.34
LINC00346Q8IVM7 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
LINC00346Q8IVM7 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LINC00346Q8IVM7 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LINC00346Q8IVM7 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC6.7□□□□□ -1.34
LINC00346Q8IVM7 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
LINC00346Q8IVM7 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC6.7□□□□□ -1.34
LINC00346Q8IVM7 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC6.7□□□□□ -1.34
LINC00346Q8IVM7 AL035696.2-201ENST00000407941 709 ntBASIC6.7□□□□□ -1.34
LINC00346Q8IVM7 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC6.7□□□□□ -1.34
LINC00346Q8IVM7 AL022100.1-202ENST00000421214 548 ntBASIC6.7□□□□□ -1.34
LINC00346Q8IVM7 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.7□□□□□ -1.34
LINC00346Q8IVM7 AF127577.3-201ENST00000430391 781 ntTSL 2 BASIC6.7□□□□□ -1.34
LINC00346Q8IVM7 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LINC00346Q8IVM7 AC239860.1-201ENST00000444680 1270 ntBASIC6.7□□□□□ -1.34
LINC00346Q8IVM7 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
LINC00346Q8IVM7 AL031736.1-201ENST00000449688 618 ntBASIC6.7□□□□□ -1.34
LINC00346Q8IVM7 AC090589.1-201ENST00000473109 362 ntBASIC6.7□□□□□ -1.34
LINC00346Q8IVM7 RN7SL153P-201ENST00000486501 292 ntBASIC6.7□□□□□ -1.34
LINC00346Q8IVM7 LINC01096-201ENST00000501050 1263 ntTSL 2 BASIC6.7□□□□□ -1.34
LINC00346Q8IVM7 AC091917.2-201ENST00000505002 744 ntBASIC6.7□□□□□ -1.34
LINC00346Q8IVM7 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.7□□□□□ -1.34
LINC00346Q8IVM7 AC100854.1-201ENST00000520351 341 ntBASIC6.7□□□□□ -1.34
LINC00346Q8IVM7 LINC01591-202ENST00000522279 1240 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 429.2 ms