Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC9.42□□□□□ -0.9
COL15A1P39059 OR7E161P-201ENST00000533722 967 ntBASIC9.42□□□□□ -0.9
COL15A1P39059 AC090971.3-201ENST00000557871 1041 ntBASIC9.42□□□□□ -0.9
COL15A1P39059 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC9.42□□□□□ -0.9
COL15A1P39059 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC9.42□□□□□ -0.9
COL15A1P39059 IGHV1OR15-3-201ENST00000564926 351 ntBASIC9.42□□□□□ -0.9
COL15A1P39059 MIR4437-201ENST00000581331 60 ntBASIC9.42□□□□□ -0.9
COL15A1P39059 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC9.42□□□□□ -0.9
COL15A1P39059 AC025287.2-201ENST00000621911 668 ntBASIC9.42□□□□□ -0.9
COL15A1P39059 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
COL15A1P39059 AL355103.1-201ENST00000557246 2226 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
COL15A1P39059 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
COL15A1P39059 TRPM3-213ENST00000396285 4701 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
COL15A1P39059 LINC01132-201ENST00000437601 3793 ntTSL 4 BASIC9.42□□□□□ -0.9
COL15A1P39059 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
COL15A1P39059 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
COL15A1P39059 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
COL15A1P39059 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
COL15A1P39059 AC016582.1-202ENST00000636341 2982 ntBASIC9.42□□□□□ -0.9
COL15A1P39059 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
COL15A1P39059 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
COL15A1P39059 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
COL15A1P39059 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
COL15A1P39059 ATXN7L1-202ENST00000419735 5417 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
COL15A1P39059 MTERF4-222ENST00000614476 4524 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
COL15A1P39059 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
COL15A1P39059 HSP90AB7P-201ENST00000450068 2454 ntBASIC9.42□□□□□ -0.9
COL15A1P39059 AC006213.1-202ENST00000589021 2176 ntTSL 2 BASIC9.41□□□□□ -0.9
COL15A1P39059 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
COL15A1P39059 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
COL15A1P39059 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
COL15A1P39059 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
COL15A1P39059 COLGALT2-202ENST00000367520 2325 ntTSL 2 BASIC9.41□□□□□ -0.9
COL15A1P39059 MIR551B-201ENST00000384984 96 ntBASIC9.41□□□□□ -0.9
COL15A1P39059 FAUP2-201ENST00000394301 401 ntBASIC9.41□□□□□ -0.9
COL15A1P39059 RPL5P27-201ENST00000437011 881 ntBASIC9.41□□□□□ -0.9
COL15A1P39059 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC9.41□□□□□ -0.9
COL15A1P39059 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC9.41□□□□□ -0.9
COL15A1P39059 SS18L2P1-201ENST00000445923 213 ntBASIC9.41□□□□□ -0.9
COL15A1P39059 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC9.41□□□□□ -0.9
COL15A1P39059 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC9.41□□□□□ -0.9
COL15A1P39059 OR52E7P-201ENST00000452394 933 ntBASIC9.41□□□□□ -0.9
COL15A1P39059 AC079193.1-201ENST00000460497 588 ntBASIC9.41□□□□□ -0.9
COL15A1P39059 RN7SL790P-201ENST00000474043 298 ntBASIC9.41□□□□□ -0.9
COL15A1P39059 RPS4XP17-201ENST00000479057 754 ntBASIC9.41□□□□□ -0.9
COL15A1P39059 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC9.41□□□□□ -0.9
COL15A1P39059 AC090142.2-201ENST00000483263 416 ntBASIC9.41□□□□□ -0.9
COL15A1P39059 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC9.41□□□□□ -0.9
COL15A1P39059 AC074386.1-206ENST00000487102 761 ntBASIC9.41□□□□□ -0.9
COL15A1P39059 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC9.41□□□□□ -0.9
COL15A1P39059 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
COL15A1P39059 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC9.41□□□□□ -0.9
COL15A1P39059 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC9.41□□□□□ -0.9
COL15A1P39059 NDUFA3P4-201ENST00000560814 250 ntBASIC9.41□□□□□ -0.9
COL15A1P39059 AC138749.2-201ENST00000566048 167 ntBASIC9.41□□□□□ -0.9
COL15A1P39059 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC9.41□□□□□ -0.9
COL15A1P39059 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC9.41□□□□□ -0.9
COL15A1P39059 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC9.41□□□□□ -0.9
COL15A1P39059 AC073529.1-202ENST00000608576 1080 ntTSL 5 BASIC9.41□□□□□ -0.9
COL15A1P39059 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC9.41□□□□□ -0.9
COL15A1P39059 AC078909.2-201ENST00000620584 398 ntBASIC9.41□□□□□ -0.9
COL15A1P39059 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC9.41□□□□□ -0.9
COL15A1P39059 AL353795.1-201ENST00000439134 1775 ntBASIC9.41□□□□□ -0.9
COL15A1P39059 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
COL15A1P39059 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
COL15A1P39059 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
COL15A1P39059 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
COL15A1P39059 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
COL15A1P39059 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
COL15A1P39059 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
COL15A1P39059 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
COL15A1P39059 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
COL15A1P39059 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
COL15A1P39059 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
COL15A1P39059 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
COL15A1P39059 RERE-203ENST00000400907 2973 ntTSL 5 BASIC9.41□□□□□ -0.9
COL15A1P39059 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
COL15A1P39059 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
COL15A1P39059 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
COL15A1P39059 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
COL15A1P39059 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
COL15A1P39059 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
COL15A1P39059 MIR187-201ENST00000385062 109 ntBASIC9.4□□□□□ -0.9
COL15A1P39059 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC9.4□□□□□ -0.9
COL15A1P39059 SNORA11.5-201ENST00000408163 128 ntBASIC9.4□□□□□ -0.9
COL15A1P39059 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC9.4□□□□□ -0.9
COL15A1P39059 EIF4A1P13-201ENST00000415667 230 ntBASIC9.4□□□□□ -0.9
COL15A1P39059 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC9.4□□□□□ -0.9
COL15A1P39059 AC010740.1-201ENST00000417035 684 ntBASIC9.4□□□□□ -0.9
COL15A1P39059 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
COL15A1P39059 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC9.4□□□□□ -0.9
COL15A1P39059 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
COL15A1P39059 AC114928.1-201ENST00000446516 415 ntBASIC9.4□□□□□ -0.9
COL15A1P39059 AC005550.2-201ENST00000476382 318 ntBASIC9.4□□□□□ -0.9
COL15A1P39059 RN7SL775P-201ENST00000498361 336 ntBASIC9.4□□□□□ -0.9
COL15A1P39059 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC9.4□□□□□ -0.9
COL15A1P39059 NACAP6-201ENST00000509572 622 ntBASIC9.4□□□□□ -0.9
COL15A1P39059 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC9.4□□□□□ -0.9
COL15A1P39059 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC9.4□□□□□ -0.9
COL15A1P39059 CHEK2P2-201ENST00000554701 672 ntBASIC9.4□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms