Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 IGKV1OR2-3-201ENST00000411475 288 ntBASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 AL137220.1-201ENST00000431369 661 ntTSL 2 BASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 OR52U1P-201ENST00000439752 923 ntBASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 RPL12P40-201ENST00000467028 488 ntBASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 AC005550.2-201ENST00000476382 318 ntBASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 AL078621.1-201ENST00000272567 768 ntBASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 RNU1-38P-201ENST00000362817 144 ntBASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 ARMCX7P-201ENST00000372828 562 ntBASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 AC020983.1-201ENST00000417063 543 ntBASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 RBM22P7-201ENST00000421321 280 ntBASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 FTH1P20-201ENST00000434913 548 ntBASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 NQO1-204ENST00000439109 924 ntTSL 2 BASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 AL451074.4-201ENST00000447545 470 ntBASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 AC009153.1-201ENST00000485799 496 ntBASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 AC016559.1-201ENST00000511420 199 ntBASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 AC018523.1-201ENST00000534211 512 ntBASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 AC087257.2-201ENST00000538759 928 ntBASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 SNORA43.5-201ENST00000631270 138 ntBASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 CASC19-208ENST00000641056 1292 ntBASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 CASC19-227ENST00000641411 1285 ntBASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 EML5-201ENST00000380664 5910 ntTSL 5 BASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 TTC3P1-201ENST00000399586 6081 ntBASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
HMG20BQ9P0W2 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 ACVR1-201ENST00000263640 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 RN7SKP36-201ENST00000363997 312 ntBASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 AL139806.1-201ENST00000403057 1002 ntBASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 AP000534.1-201ENST00000444162 1294 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 RN7SL332P-201ENST00000482163 254 ntBASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 AC010409.2-201ENST00000505780 478 ntBASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 AC111000.1-201ENST00000514545 713 ntBASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 MYL6-211ENST00000548580 528 ntTSL 2 BASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 AP006587.6-201ENST00000582128 1091 ntBASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 EIF1-207ENST00000591776 797 ntTSL 4 BASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 AC006116.6-201ENST00000593258 1103 ntBASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 RPS11-203ENST00000596873 583 ntTSL 2 BASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 AC099667.1-201ENST00000624222 469 ntBASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 AC023818.2-201ENST00000623817 2304 ntBASIC9.11□□□□□ -0.95
HMG20BQ9P0W2 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms