Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC9.45□□□□□ -0.9
COL15A1P39059 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
COL15A1P39059 AC093616.1-201ENST00000427434 2095 ntBASIC9.45□□□□□ -0.9
COL15A1P39059 AL353763.2-201ENST00000623489 1903 ntBASIC9.45□□□□□ -0.9
COL15A1P39059 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
COL15A1P39059 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
COL15A1P39059 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
COL15A1P39059 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
COL15A1P39059 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
COL15A1P39059 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
COL15A1P39059 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
COL15A1P39059 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
COL15A1P39059 HDAC1P1-201ENST00000455482 1445 ntBASIC9.44□□□□□ -0.9
COL15A1P39059 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC9.44□□□□□ -0.9
COL15A1P39059 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC9.44□□□□□ -0.9
COL15A1P39059 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
COL15A1P39059 AL034417.1-201ENST00000399343 800 ntBASIC9.44□□□□□ -0.9
COL15A1P39059 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC9.44□□□□□ -0.9
COL15A1P39059 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC9.44□□□□□ -0.9
COL15A1P39059 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
COL15A1P39059 MED28P7-201ENST00000456611 530 ntBASIC9.44□□□□□ -0.9
COL15A1P39059 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC9.44□□□□□ -0.9
COL15A1P39059 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC9.44□□□□□ -0.9
COL15A1P39059 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC9.44□□□□□ -0.9
COL15A1P39059 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC9.44□□□□□ -0.9
COL15A1P39059 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC9.44□□□□□ -0.9
COL15A1P39059 AL035422.2-201ENST00000603059 565 ntBASIC9.44□□□□□ -0.9
COL15A1P39059 SNX29P2-204ENST00000603801 875 ntBASIC9.44□□□□□ -0.9
COL15A1P39059 pRNA.12-201ENST00000614353 90 ntBASIC9.44□□□□□ -0.9
COL15A1P39059 pRNA.3-201ENST00000615048 90 ntBASIC9.44□□□□□ -0.9
COL15A1P39059 HOTTIP_2.1-201ENST00000616633 376 ntBASIC9.44□□□□□ -0.9
COL15A1P39059 AL356585.10-201ENST00000641883 123 ntBASIC9.44□□□□□ -0.9
COL15A1P39059 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
COL15A1P39059 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
COL15A1P39059 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
COL15A1P39059 DPYSL2-201ENST00000311151 4603 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
COL15A1P39059 MARCH6-204ENST00000503788 2874 ntTSL 2 BASIC9.44□□□□□ -0.9
COL15A1P39059 PRSS51-203ENST00000636217 2255 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
COL15A1P39059 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
COL15A1P39059 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
COL15A1P39059 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
COL15A1P39059 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
COL15A1P39059 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
COL15A1P39059 NOS2P3-202ENST00000458685 3328 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
COL15A1P39059 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
COL15A1P39059 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC9.43□□□□□ -0.9
COL15A1P39059 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC9.43□□□□□ -0.9
COL15A1P39059 IST1-208ENST00000535424 4082 ntTSL 5 BASIC9.43□□□□□ -0.9
COL15A1P39059 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
COL15A1P39059 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
COL15A1P39059 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
COL15A1P39059 RN7SKP184-201ENST00000362348 333 ntBASIC9.43□□□□□ -0.9
COL15A1P39059 EEF1GP6-201ENST00000402309 905 ntBASIC9.43□□□□□ -0.9
COL15A1P39059 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC9.43□□□□□ -0.9
COL15A1P39059 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
COL15A1P39059 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC9.43□□□□□ -0.9
COL15A1P39059 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC9.43□□□□□ -0.9
COL15A1P39059 RPL12P40-201ENST00000467028 488 ntBASIC9.43□□□□□ -0.9
COL15A1P39059 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC9.43□□□□□ -0.9
COL15A1P39059 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC9.43□□□□□ -0.9
COL15A1P39059 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC9.43□□□□□ -0.9
COL15A1P39059 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
COL15A1P39059 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC9.43□□□□□ -0.9
COL15A1P39059 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
COL15A1P39059 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
COL15A1P39059 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC9.43□□□□□ -0.9
COL15A1P39059 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
COL15A1P39059 AC138627.1-203ENST00000641872 1680 ntBASIC9.43□□□□□ -0.9
COL15A1P39059 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
COL15A1P39059 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
COL15A1P39059 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC9.43□□□□□ -0.9
COL15A1P39059 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
COL15A1P39059 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
COL15A1P39059 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC9.43□□□□□ -0.9
COL15A1P39059 TNFAIP8-206ENST00000504771 8681 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
COL15A1P39059 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
COL15A1P39059 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
COL15A1P39059 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC9.43□□□□□ -0.9
COL15A1P39059 AL353807.3-201ENST00000500626 2505 ntBASIC9.43□□□□□ -0.9
COL15A1P39059 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
COL15A1P39059 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
COL15A1P39059 UBXN10-201ENST00000375099 5571 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
COL15A1P39059 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC9.42□□□□□ -0.9
COL15A1P39059 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
COL15A1P39059 BBS9-203ENST00000355070 4004 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
COL15A1P39059 NDE1-202ENST00000396355 3936 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
COL15A1P39059 ARSFP1-201ENST00000398758 477 ntBASIC9.42□□□□□ -0.9
COL15A1P39059 OOSP1-201ENST00000398992 1270 ntBASIC9.42□□□□□ -0.9
COL15A1P39059 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC9.42□□□□□ -0.9
COL15A1P39059 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC9.42□□□□□ -0.9
COL15A1P39059 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC9.42□□□□□ -0.9
COL15A1P39059 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC9.42□□□□□ -0.9
COL15A1P39059 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC9.42□□□□□ -0.9
COL15A1P39059 AC244505.2-201ENST00000435089 759 ntBASIC9.42□□□□□ -0.9
COL15A1P39059 AL731892.1-201ENST00000437364 1192 ntBASIC9.42□□□□□ -0.9
COL15A1P39059 AC005040.1-201ENST00000437783 482 ntBASIC9.42□□□□□ -0.9
COL15A1P39059 HMGN1P32-201ENST00000441744 256 ntBASIC9.42□□□□□ -0.9
COL15A1P39059 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC9.42□□□□□ -0.9
COL15A1P39059 IGKV2-29-201ENST00000521304 372 ntBASIC9.42□□□□□ -0.9
COL15A1P39059 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC9.42□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms