Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 AC098850.2-201ENST00000578710 686 ntTSL 5 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 AC073911.1-201ENST00000592296 504 ntTSL 5 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 AL592504.1-201ENST00000605319 439 ntBASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 RN7SL840P-201ENST00000606883 284 ntBASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 RBM22P4-201ENST00000613117 1240 ntBASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 AC005790.1-201ENST00000619774 450 ntBASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 AP000484.1-201ENST00000620067 1252 ntBASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 CU638689.4-203ENST00000625185 785 ntTSL 5 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 ZCCHC17-209ENST00000627541 1158 ntTSL 5 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 AL590065.1-201ENST00000603371 4774 ntBASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 ZNRD1ASP-211ENST00000376797 3270 ntTSL 2 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 GBP7-201ENST00000294671 2454 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 TTF1-201ENST00000334270 3052 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 UBR4-201ENST00000375218 4031 ntTSL 2 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 KIAA1217-201ENST00000307544 3281 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
TRIM48Q8IWZ4 HCP5-201ENST00000414046 2658 ntTSL 4 BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 LINC01132-201ENST00000437601 3793 ntTSL 4 BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 GRIA2-201ENST00000264426 3445 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 ZEB2-205ENST00000419938 1755 ntTSL 2 BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 TCTN1-201ENST00000377654 1539 ntTSL 5 BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 BTN2A1-201ENST00000312541 2920 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 AC010983.1-201ENST00000418387 1028 ntTSL 5 BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 MTCYBP11-201ENST00000447254 1109 ntBASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 LDHBP2-201ENST00000456969 1005 ntBASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 AC080129.1-201ENST00000457815 406 ntTSL 3 BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 AL590326.1-201ENST00000460857 334 ntBASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 EIF2S2P4-201ENST00000461070 984 ntBASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 THAP2-202ENST00000547843 672 ntTSL 2 BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 OR4N1P-201ENST00000554847 949 ntBASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 OR4H6P-202ENST00000603819 340 ntBASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 AP000436.1-201ENST00000605239 800 ntBASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 CGA-202ENST00000610310 615 ntTSL 3 BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 OR4G3P-201ENST00000633500 913 ntBASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 LINC00598-212ENST00000637124 905 ntTSL 5 BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 EFCAB7-201ENST00000371088 2313 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 TRIM49-202ENST00000532501 1437 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 FER-209ENST00000618353 1420 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 SNRPB2-201ENST00000246071 2452 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 AC108099.1-201ENST00000564402 3258 ntBASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 SOCS5P4-201ENST00000454743 1566 ntBASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
TRIM48Q8IWZ4 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 DET1-202ENST00000444300 2154 ntTSL 5 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 TTTY7-201ENST00000276770 1367 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 TTTY7B-201ENST00000276779 1367 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 LAX1-202ENST00000367217 1356 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 AC105760.1-201ENST00000244820 2231 ntTSL 2 BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 CHODL-203ENST00000400127 2239 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
TRIM48Q8IWZ4 AC127502.2-201ENST00000602663 2351 ntBASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms