Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 OFCC1-201ENST00000316020 863 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 Y_RNA.77-201ENST00000362962 107 ntBASIC9.63□□□□□ -0.87
ALDH1A1P00352 RNU6-1214P-201ENST00000363650 109 ntBASIC9.63□□□□□ -0.87
ALDH1A1P00352 FANK1-201ENST00000368689 522 ntTSL 3 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALDH1A1P00352 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 RPSAP44-201ENST00000406712 884 ntBASIC9.63□□□□□ -0.87
ALDH1A1P00352 RN7SKP117-201ENST00000410175 264 ntBASIC9.63□□□□□ -0.87
ALDH1A1P00352 AC003080.1-201ENST00000413552 767 ntBASIC9.63□□□□□ -0.87
ALDH1A1P00352 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 AC241520.1-201ENST00000422654 1099 ntBASIC9.63□□□□□ -0.87
ALDH1A1P00352 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 MED15P9-201ENST00000424716 533 ntBASIC9.63□□□□□ -0.87
ALDH1A1P00352 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
ALDH1A1P00352 AL022721.1-201ENST00000436521 505 ntBASIC9.63□□□□□ -0.87
ALDH1A1P00352 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 GRM8-206ENST00000444921 1251 ntTSL 3 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 AL136452.1-201ENST00000448495 439 ntBASIC9.63□□□□□ -0.87
ALDH1A1P00352 AC092634.4-203ENST00000451395 448 ntBASIC9.63□□□□□ -0.87
ALDH1A1P00352 AC134050.1-201ENST00000495088 933 ntBASIC9.63□□□□□ -0.87
ALDH1A1P00352 AC008638.2-201ENST00000503840 715 ntBASIC9.63□□□□□ -0.87
ALDH1A1P00352 AC098583.2-201ENST00000504151 372 ntBASIC9.63□□□□□ -0.87
ALDH1A1P00352 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 UGT2B29P-201ENST00000509021 973 ntBASIC9.63□□□□□ -0.87
ALDH1A1P00352 AC017007.1-201ENST00000511960 415 ntBASIC9.63□□□□□ -0.87
ALDH1A1P00352 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 MRVI1-AS1-201ENST00000525578 829 ntTSL 3 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 AL020996.2-202ENST00000527604 334 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 OVCH1-AS1-201ENST00000549411 743 ntTSL 3 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 CKS1BP1-201ENST00000555221 240 ntBASIC9.63□□□□□ -0.87
ALDH1A1P00352 AC007262.1-201ENST00000604099 321 ntBASIC9.63□□□□□ -0.87
ALDH1A1P00352 AC009502.1-202ENST00000606673 602 ntTSL 3 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 RN7SL840P-201ENST00000606883 284 ntBASIC9.63□□□□□ -0.87
ALDH1A1P00352 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALDH1A1P00352 AC004241.3-201ENST00000611728 517 ntBASIC9.63□□□□□ -0.87
ALDH1A1P00352 OFCC1-217ENST00000611763 875 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 AC025253.1-201ENST00000613623 543 ntBASIC9.63□□□□□ -0.87
ALDH1A1P00352 AL606760.4-201ENST00000617613 718 ntBASIC9.63□□□□□ -0.87
ALDH1A1P00352 AP000851.2-201ENST00000629499 721 ntTSL 3 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 AL139811.2-201ENST00000373465 1630 ntBASIC9.63□□□□□ -0.87
ALDH1A1P00352 AP003086.1-201ENST00000513207 1642 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
ALDH1A1P00352 MSL3-202ENST00000337339 3446 ntTSL 2 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 AL356019.2-201ENST00000556738 3829 ntBASIC9.63□□□□□ -0.87
ALDH1A1P00352 FOXP1-209ENST00000475937 4967 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
ALDH1A1P00352 DOCK2-217ENST00000540750 1753 ntTSL 5 BASIC9.63□□□□□ -0.87
ALDH1A1P00352 BCL2L13-203ENST00000355028 4458 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
ALDH1A1P00352 GJB2-201ENST00000382844 2309 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
ALDH1A1P00352 SLAMF7-206ENST00000458104 2345 ntTSL 2 BASIC9.62□□□□□ -0.87
ALDH1A1P00352 STAU1-207ENST00000371856 3684 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
ALDH1A1P00352 ZC3H15-201ENST00000337859 2138 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
ALDH1A1P00352 FAM196A-202ENST00000522781 4403 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
ALDH1A1P00352 AC084876.2-201ENST00000624844 1709 ntBASIC9.62□□□□□ -0.87
ALDH1A1P00352 TUBB-205ENST00000327892 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
ALDH1A1P00352 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
ALDH1A1P00352 PAN2-203ENST00000440411 4576 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
ALDH1A1P00352 AC117945.2-201ENST00000642109 1521 ntBASIC9.62□□□□□ -0.87
ALDH1A1P00352 MAK-201ENST00000313243 3984 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
ALDH1A1P00352 SBNO1-203ENST00000602398 4313 ntAPPRIS ALT1 TSL 5 BASIC9.62□□□□□ -0.87
ALDH1A1P00352 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
ALDH1A1P00352 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
ALDH1A1P00352 SULF1-203ENST00000419716 4697 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
ALDH1A1P00352 AC040162.3-201ENST00000572067 3907 ntBASIC9.62□□□□□ -0.87
ALDH1A1P00352 AP001120.1-201ENST00000561598 3710 ntBASIC9.62□□□□□ -0.87
ALDH1A1P00352 NVL-211ENST00000469075 2566 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
ALDH1A1P00352 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC9.62□□□□□ -0.87
ALDH1A1P00352 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
ALDH1A1P00352 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
ALDH1A1P00352 RNU6-797P-201ENST00000363101 109 ntBASIC9.62□□□□□ -0.87
ALDH1A1P00352 RNA5SP442-201ENST00000365050 107 ntBASIC9.62□□□□□ -0.87
ALDH1A1P00352 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
ALDH1A1P00352 SFR1P1-201ENST00000403720 688 ntBASIC9.62□□□□□ -0.87
ALDH1A1P00352 TIMD4-202ENST00000406964 581 ntTSL 2 BASIC9.62□□□□□ -0.87
ALDH1A1P00352 AL358178.1-201ENST00000407698 397 ntBASIC9.62□□□□□ -0.87
ALDH1A1P00352 AC093107.1-201ENST00000422772 609 ntBASIC9.62□□□□□ -0.87
ALDH1A1P00352 ZNF863P-201ENST00000426746 417 ntBASIC9.62□□□□□ -0.87
ALDH1A1P00352 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC9.62□□□□□ -0.87
ALDH1A1P00352 IFNNP1-201ENST00000429219 553 ntBASIC9.62□□□□□ -0.87
ALDH1A1P00352 RPL12P4-201ENST00000432629 497 ntBASIC9.62□□□□□ -0.87
ALDH1A1P00352 MED28P4-201ENST00000433137 572 ntBASIC9.62□□□□□ -0.87
ALDH1A1P00352 AL360221.1-201ENST00000445989 335 ntBASIC9.62□□□□□ -0.87
ALDH1A1P00352 HAUS6P3-201ENST00000456660 1107 ntBASIC9.62□□□□□ -0.87
ALDH1A1P00352 NUTF2P4-201ENST00000458353 381 ntBASIC9.62□□□□□ -0.87
ALDH1A1P00352 RPL29P25-201ENST00000465069 850 ntBASIC9.62□□□□□ -0.87
ALDH1A1P00352 RPL12P32-201ENST00000484010 494 ntBASIC9.62□□□□□ -0.87
ALDH1A1P00352 HMGB1P38-201ENST00000490557 577 ntBASIC9.62□□□□□ -0.87
ALDH1A1P00352 PAQR9-AS1-202ENST00000493825 576 ntTSL 2 BASIC9.62□□□□□ -0.87
ALDH1A1P00352 AC114300.1-201ENST00000502347 280 ntBASIC9.62□□□□□ -0.87
ALDH1A1P00352 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC9.62□□□□□ -0.87
ALDH1A1P00352 RN7SKP242-201ENST00000515967 289 ntBASIC9.62□□□□□ -0.87
ALDH1A1P00352 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC9.62□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms