Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AL133371.3-201ENST00000556197 549 ntTSL 4 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 AC090286.3-201ENST00000573133 187 ntBASIC9.76□□□□□ -0.85
LRCH3Q96II8 RBM22P1-201ENST00000578589 1214 ntBASIC9.76□□□□□ -0.85
LRCH3Q96II8 MIR4450-201ENST00000583589 65 ntBASIC9.76□□□□□ -0.85
LRCH3Q96II8 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 AC015688.2-201ENST00000584523 262 ntBASIC9.76□□□□□ -0.85
LRCH3Q96II8 AC090213.1-201ENST00000586841 546 ntTSL 4 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 AC006130.1-201ENST00000589365 555 ntTSL 4 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 uc_338.2-201ENST00000612963 182 ntBASIC9.76□□□□□ -0.85
LRCH3Q96II8 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC9.76□□□□□ -0.85
LRCH3Q96II8 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 WBP11P1-202ENST00000567636 2972 ntBASIC9.76□□□□□ -0.85
LRCH3Q96II8 AFAP1L2-201ENST00000304129 3705 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
LRCH3Q96II8 TRAF1-203ENST00000546084 3715 ntTSL 2 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 AC007938.4-201ENST00000610046 4118 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LRCH3Q96II8 PDZK1-201ENST00000344770 2084 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 FSD2-201ENST00000334574 6418 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LRCH3Q96II8 AC136944.2-201ENST00000568752 3971 ntBASIC9.76□□□□□ -0.85
LRCH3Q96II8 USP4-202ENST00000351842 3222 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LRCH3Q96II8 TMEM168-206ENST00000454074 2659 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 SEC31A-227ENST00000508502 3801 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
LRCH3Q96II8 MAP4-205ENST00000420772 3478 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 ANKRD55-203ENST00000504958 2139 ntTSL 5 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 BCL2L13-203ENST00000355028 4458 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LRCH3Q96II8 NOP2-202ENST00000382421 2736 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
LRCH3Q96II8 ZNF155-209ENST00000611002 2732 ntAPPRIS P3 TSL 4 BASIC9.76□□□□□ -0.85
LRCH3Q96II8 ZC3H14-203ENST00000318308 1384 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LRCH3Q96II8 AGK-203ENST00000473247 1550 ntTSL 5 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LRCH3Q96II8 C1S-201ENST00000328916 2972 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LRCH3Q96II8 AP003716.1-202ENST00000511677 3387 ntTSL 2 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 ARMC4-201ENST00000305242 3572 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LRCH3Q96II8 PWRN1-212ENST00000569908 1435 ntBASIC9.75□□□□□ -0.85
LRCH3Q96II8 SLC25A44-202ENST00000423538 3662 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LRCH3Q96II8 CDCA8-202ENST00000373055 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LRCH3Q96II8 TTPAL-202ENST00000372904 6234 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LRCH3Q96II8 ATP8B1-201ENST00000283684 5818 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LRCH3Q96II8 NCAPG2-203ENST00000409423 3957 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 CES5A-208ENST00000541580 1669 ntTSL 5 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 KDM3A-202ENST00000409064 4621 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LRCH3Q96II8 ZNF91-201ENST00000300619 5489 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
LRCH3Q96II8 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LRCH3Q96II8 SPINK6-201ENST00000325630 686 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LRCH3Q96II8 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LRCH3Q96II8 MIR421-201ENST00000365696 85 ntBASIC9.75□□□□□ -0.85
LRCH3Q96II8 C10orf126-201ENST00000375520 2149 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LRCH3Q96II8 MIR431-201ENST00000385266 114 ntBASIC9.75□□□□□ -0.85
LRCH3Q96II8 FAM3B-202ENST00000398646 1026 ntTSL 5 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 AL590002.1-201ENST00000406554 418 ntBASIC9.75□□□□□ -0.85
LRCH3Q96II8 MIR1296-201ENST00000408136 92 ntBASIC9.75□□□□□ -0.85
LRCH3Q96II8 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 Z68694.1-201ENST00000413929 841 ntBASIC9.75□□□□□ -0.85
LRCH3Q96II8 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 RPSAP8-201ENST00000429844 889 ntBASIC9.75□□□□□ -0.85
LRCH3Q96II8 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 TPMTP4-201ENST00000450749 678 ntBASIC9.75□□□□□ -0.85
LRCH3Q96II8 AL109741.2-201ENST00000455561 343 ntBASIC9.75□□□□□ -0.85
LRCH3Q96II8 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 AP000852.1-201ENST00000472460 573 ntBASIC9.75□□□□□ -0.85
LRCH3Q96II8 MARK2P8-201ENST00000476069 952 ntBASIC9.75□□□□□ -0.85
LRCH3Q96II8 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LRCH3Q96II8 MTATP6P22-201ENST00000507369 598 ntBASIC9.75□□□□□ -0.85
LRCH3Q96II8 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LRCH3Q96II8 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 AC008453.1-201ENST00000511626 425 ntTSL 3 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 AC107074.1-201ENST00000513617 764 ntTSL 3 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 AP001804.1-201ENST00000526868 919 ntBASIC9.75□□□□□ -0.85
LRCH3Q96II8 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 AP000820.1-201ENST00000545912 506 ntTSL 3 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 TAS2R38-201ENST00000547270 1143 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 AC008127.2-201ENST00000549925 1075 ntBASIC9.75□□□□□ -0.85
LRCH3Q96II8 AL442663.2-201ENST00000554385 511 ntBASIC9.75□□□□□ -0.85
LRCH3Q96II8 AL137230.2-201ENST00000555070 452 ntTSL 3 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 ZNF519P2-201ENST00000557032 169 ntBASIC9.75□□□□□ -0.85
LRCH3Q96II8 AC018618.1-202ENST00000559590 395 ntTSL 3 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 GS1-279B7.1-201ENST00000562817 399 ntTSL 5 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 BCAP31P2-201ENST00000563143 399 ntBASIC9.75□□□□□ -0.85
LRCH3Q96II8 ZNF771-203ENST00000564550 1187 ntTSL 5 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 BCAP31P1-201ENST00000565437 385 ntBASIC9.75□□□□□ -0.85
LRCH3Q96II8 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 AC022432.1-201ENST00000595739 310 ntBASIC9.75□□□□□ -0.85
LRCH3Q96II8 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 AP002840.2-201ENST00000602900 640 ntBASIC9.75□□□□□ -0.85
LRCH3Q96II8 AC079880.2-201ENST00000603790 1213 ntBASIC9.75□□□□□ -0.85
LRCH3Q96II8 AL356052.1-201ENST00000605764 376 ntBASIC9.75□□□□□ -0.85
LRCH3Q96II8 AC092681.3-201ENST00000609463 678 ntBASIC9.75□□□□□ -0.85
LRCH3Q96II8 AC244093.5-201ENST00000619606 718 ntTSL 4 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 AC015660.5-201ENST00000623238 564 ntBASIC9.75□□□□□ -0.85
LRCH3Q96II8 AC079456.1-201ENST00000624010 480 ntBASIC9.75□□□□□ -0.85
LRCH3Q96II8 AC019080.5-201ENST00000624891 757 ntBASIC9.75□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms