Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SERPIND1-201ENST00000215727 2437 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 P2RY14-201ENST00000309170 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 AC104078.1-201ENST00000499292 1448 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 SYTL2-228ENST00000533892 1441 ntTSL 2 BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 LINC01482-201ENST00000585484 2616 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 XIRP2-202ENST00000409043 3292 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 AC110015.1-201ENST00000423367 440 ntTSL 3 BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 RPL7P14-201ENST00000449851 741 ntBASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 AL359839.1-201ENST00000451975 1160 ntBASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 SUMO2P10-201ENST00000452006 288 ntBASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 AC114982.2-201ENST00000461396 358 ntBASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 AC233724.1-201ENST00000503894 233 ntBASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 AC092818.1-201ENST00000523411 639 ntTSL 3 BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 SDHCP4-201ENST00000532834 510 ntBASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 OR7E2P-201ENST00000533071 889 ntBASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 MIR6736-201ENST00000616799 59 ntBASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 AC068234.2-201ENST00000619646 522 ntBASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 OR5AU1-204ENST00000641822 1197 ntBASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 AC027313.1-201ENST00000509159 1666 ntBASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
CDK5RAP1Q96SZ6 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 CU633906.2-205ENST00000624847 1468 ntTSL 5 BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 RN7SKP1-201ENST00000365525 307 ntBASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 RBMY2JP-201ENST00000425544 1059 ntBASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 AC108039.2-201ENST00000440214 359 ntBASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 BTBD7P2-201ENST00000441962 620 ntBASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 ARMC8P1-201ENST00000443069 1289 ntBASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 AL024493.1-201ENST00000449217 833 ntBASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 MTCO3P42-201ENST00000509488 518 ntBASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 MTCO3P39-201ENST00000514812 518 ntBASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 RN7SKP105-201ENST00000517192 314 ntBASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 HIGD1AP9-201ENST00000550710 279 ntBASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC8.03□□□□□ -1.12
CDK5RAP1Q96SZ6 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms