Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 BRDT-205ENST00000399546 3357 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
FNDC3BQ53EP0 LNX1-201ENST00000263925 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
FNDC3BQ53EP0 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
FNDC3BQ53EP0 CCRL2-204ENST00000400882 1642 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
FNDC3BQ53EP0 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
FNDC3BQ53EP0 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
FNDC3BQ53EP0 GIMAP2-201ENST00000223293 1449 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
FNDC3BQ53EP0 ZNF887P-201ENST00000431363 1407 ntBASIC8.03□□□□□ -1.12
FNDC3BQ53EP0 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
FNDC3BQ53EP0 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC8.03□□□□□ -1.12
FNDC3BQ53EP0 OR8G3P-203ENST00000641848 1344 ntBASIC8.03□□□□□ -1.12
FNDC3BQ53EP0 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC8.02□□□□□ -1.12
FNDC3BQ53EP0 A2ML1-205ENST00000539547 3460 ntTSL 2 BASIC8.02□□□□□ -1.12
FNDC3BQ53EP0 DUXAP8-204ENST00000447898 4136 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
FNDC3BQ53EP0 EPHB2-201ENST00000374627 4014 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.12
FNDC3BQ53EP0 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
FNDC3BQ53EP0 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC8.02□□□□□ -1.12
FNDC3BQ53EP0 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 GJB2-201ENST00000382844 2309 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 KCNMB2-207ENST00000452583 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 MTRF1-202ENST00000379477 1948 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 AC130456.1-201ENST00000565085 1363 ntBASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 MPI-213ENST00000566377 2809 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 AP001042.1-201ENST00000416842 487 ntTSL 3 BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 AC013268.2-201ENST00000420753 337 ntBASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 AL354732.1-204ENST00000421020 755 ntTSL 3 BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 LINC00851-201ENST00000423033 727 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 AC011747.1-201ENST00000425678 565 ntTSL 4 BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 GAPDHP32-201ENST00000433816 998 ntBASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 MORF4L1P4-201ENST00000450245 976 ntBASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 PCMTD1P3-201ENST00000451824 472 ntBASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 MKNK1-207ENST00000465783 464 ntTSL 2 BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 PANCR-201ENST00000503456 493 ntTSL 5 BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 RN7SKP157-201ENST00000516174 282 ntBASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 IGLV10-67-201ENST00000519446 325 ntBASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 HIGD1AP9-201ENST00000550710 279 ntBASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 AC092133.1-201ENST00000565828 719 ntBASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 AC022558.2-201ENST00000566841 754 ntTSL 5 BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 BOLA2P1-201ENST00000584794 232 ntBASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 FXYD1-205ENST00000588607 619 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 AC090330.1-201ENST00000588646 764 ntBASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 AP003117.1-201ENST00000602771 554 ntBASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 RNVU1-19-201ENST00000613023 167 ntBASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 FAM184A-213ENST00000617072 1251 ntTSL 2 BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 AL590410.1-201ENST00000617925 333 ntBASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 AC068234.2-201ENST00000619646 522 ntBASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 AC073857.1-201ENST00000625082 1054 ntBASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 SLC6A2-206ENST00000567238 3160 ntTSL 2 BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 BDNF-204ENST00000395980 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 BTN2A1-203ENST00000429381 3113 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 GOT2P1-201ENST00000440922 1309 ntBASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 SYTL4-204ENST00000372989 3885 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 AHCYL2-208ENST00000474594 2047 ntTSL 2 BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC8.02□□□□□ -1.13
FNDC3BQ53EP0 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
FNDC3BQ53EP0 TMEM45A-201ENST00000323523 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
FNDC3BQ53EP0 DNAJC5G-202ENST00000402462 1904 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
FNDC3BQ53EP0 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
FNDC3BQ53EP0 PTER-203ENST00000423462 3212 ntTSL 3 BASIC8.01□□□□□ -1.13
FNDC3BQ53EP0 SELENOT-202ENST00000471696 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
FNDC3BQ53EP0 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
FNDC3BQ53EP0 ZSCAN32-201ENST00000304926 3027 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
FNDC3BQ53EP0 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
FNDC3BQ53EP0 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC8.01□□□□□ -1.13
FNDC3BQ53EP0 AC138207.6-201ENST00000579164 1967 ntBASIC8.01□□□□□ -1.13
FNDC3BQ53EP0 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC8.01□□□□□ -1.13
FNDC3BQ53EP0 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
FNDC3BQ53EP0 MAPK10-248ENST00000640490 2715 ntTSL 5 BASIC8.01□□□□□ -1.13
FNDC3BQ53EP0 ARHGDIB-201ENST00000228945 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
FNDC3BQ53EP0 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
FNDC3BQ53EP0 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
FNDC3BQ53EP0 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
FNDC3BQ53EP0 CAPNS1P1-201ENST00000401029 633 ntBASIC8.01□□□□□ -1.13
FNDC3BQ53EP0 RPL12P27-201ENST00000414870 496 ntBASIC8.01□□□□□ -1.13
FNDC3BQ53EP0 AL357078.2-201ENST00000416486 427 ntBASIC8.01□□□□□ -1.13
FNDC3BQ53EP0 RPS6KA2-IT1-201ENST00000416770 579 ntTSL 3 BASIC8.01□□□□□ -1.13
FNDC3BQ53EP0 AL354692.1-201ENST00000423044 315 ntBASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms