Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SLC1A1P43005 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SLC1A1P43005 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SLC1A1P43005 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC7.93□□□□□ -1.14
SLC1A1P43005 CENPK-208ENST00000508421 1586 ntTSL 3 BASIC7.93□□□□□ -1.14
SLC1A1P43005 ARHGAP42P4-201ENST00000549782 2934 ntBASIC7.93□□□□□ -1.14
SLC1A1P43005 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SLC1A1P43005 AL359922.2-201ENST00000581788 3017 ntBASIC7.93□□□□□ -1.14
SLC1A1P43005 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
SLC1A1P43005 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SLC1A1P43005 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
SLC1A1P43005 AC027313.1-201ENST00000509159 1666 ntBASIC7.93□□□□□ -1.14
SLC1A1P43005 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SLC1A1P43005 AL139327.1-201ENST00000382988 348 ntBASIC7.93□□□□□ -1.14
SLC1A1P43005 LINC01424-201ENST00000417820 1031 ntTSL 2 BASIC7.93□□□□□ -1.14
SLC1A1P43005 BMS1P12-201ENST00000428213 706 ntBASIC7.93□□□□□ -1.14
SLC1A1P43005 EEF1A1P27-201ENST00000429983 1135 ntBASIC7.93□□□□□ -1.14
SLC1A1P43005 Z83313.1-201ENST00000433780 718 ntBASIC7.93□□□□□ -1.14
SLC1A1P43005 AP001595.1-201ENST00000435878 516 ntTSL 2 BASIC7.93□□□□□ -1.14
SLC1A1P43005 RN7SL861P-201ENST00000473793 285 ntBASIC7.93□□□□□ -1.14
SLC1A1P43005 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC7.93□□□□□ -1.14
SLC1A1P43005 AC114786.3-201ENST00000509304 705 ntBASIC7.93□□□□□ -1.14
SLC1A1P43005 LINC02162-201ENST00000512521 574 ntTSL 4 BASIC7.93□□□□□ -1.14
SLC1A1P43005 AC084251.1-201ENST00000521867 382 ntBASIC7.93□□□□□ -1.14
SLC1A1P43005 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC7.93□□□□□ -1.14
SLC1A1P43005 AC073896.5-201ENST00000546464 542 ntTSL 5 BASIC7.93□□□□□ -1.14
SLC1A1P43005 AL132719.1-201ENST00000554515 423 ntTSL 3 BASIC7.93□□□□□ -1.14
SLC1A1P43005 AC093283.1-201ENST00000565306 1075 ntBASIC7.93□□□□□ -1.14
SLC1A1P43005 AC006115.1-201ENST00000599726 517 ntTSL 5 BASIC7.93□□□□□ -1.14
SLC1A1P43005 AC008626.1-201ENST00000604384 255 ntBASIC7.93□□□□□ -1.14
SLC1A1P43005 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC7.93□□□□□ -1.14
SLC1A1P43005 RN7SL3-201ENST00000610674 299 ntBASIC7.93□□□□□ -1.14
SLC1A1P43005 ELMO2P1-202ENST00000614283 794 ntBASIC7.93□□□□□ -1.14
SLC1A1P43005 AC068205.4-201ENST00000637880 804 ntBASIC7.93□□□□□ -1.14
SLC1A1P43005 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.93□□□□□ -1.14
SLC1A1P43005 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SLC1A1P43005 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
SLC1A1P43005 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
SLC1A1P43005 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SLC1A1P43005 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SLC1A1P43005 AL355312.2-201ENST00000455607 1541 ntTSL 5 BASIC7.93□□□□□ -1.14
SLC1A1P43005 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
SLC1A1P43005 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC7.92□□□□□ -1.14
SLC1A1P43005 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.92□□□□□ -1.14
SLC1A1P43005 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.92□□□□□ -1.14
SLC1A1P43005 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SLC1A1P43005 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
SLC1A1P43005 TMED5-201ENST00000370280 750 ntTSL 2 BASIC7.92□□□□□ -1.14
SLC1A1P43005 MIR498-201ENST00000385134 124 ntBASIC7.92□□□□□ -1.14
SLC1A1P43005 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
SLC1A1P43005 RPL5P5-201ENST00000392009 893 ntBASIC7.92□□□□□ -1.14
SLC1A1P43005 LINC01715-201ENST00000420776 624 ntTSL 2 BASIC7.92□□□□□ -1.14
SLC1A1P43005 RPL19P21-201ENST00000424919 591 ntBASIC7.92□□□□□ -1.14
SLC1A1P43005 RPL5P34-201ENST00000426545 891 ntBASIC7.92□□□□□ -1.14
SLC1A1P43005 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.92□□□□□ -1.14
SLC1A1P43005 RPL5P9-201ENST00000448118 886 ntBASIC7.92□□□□□ -1.14
SLC1A1P43005 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC7.92□□□□□ -1.14
SLC1A1P43005 RN7SL180P-201ENST00000466769 294 ntBASIC7.92□□□□□ -1.14
SLC1A1P43005 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC7.92□□□□□ -1.14
SLC1A1P43005 AL591767.1-201ENST00000557160 568 ntTSL 4 BASIC7.92□□□□□ -1.14
SLC1A1P43005 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC7.92□□□□□ -1.14
SLC1A1P43005 SAXO2-204ENST00000565432 811 ntAPPRIS ALT2 TSL 4 BASIC7.92□□□□□ -1.14
SLC1A1P43005 RBM22P13-201ENST00000569805 1244 ntBASIC7.92□□□□□ -1.14
SLC1A1P43005 RN7SL14P-201ENST00000579715 298 ntBASIC7.92□□□□□ -1.14
SLC1A1P43005 RN7SL237P-201ENST00000580912 287 ntBASIC7.92□□□□□ -1.14
SLC1A1P43005 APOC2-202ENST00000585786 880 ntTSL 2 BASIC7.92□□□□□ -1.14
SLC1A1P43005 APOC2-204ENST00000591597 447 ntTSL 5 BASIC7.92□□□□□ -1.14
SLC1A1P43005 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC7.92□□□□□ -1.14
SLC1A1P43005 Metazoa_SRP.39-201ENST00000614194 271 ntBASIC7.92□□□□□ -1.14
SLC1A1P43005 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SLC1A1P43005 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC7.92□□□□□ -1.14
SLC1A1P43005 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SLC1A1P43005 EEF1A1P2-201ENST00000553854 1447 ntBASIC7.92□□□□□ -1.14
SLC1A1P43005 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.92□□□□□ -1.14
SLC1A1P43005 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SLC1A1P43005 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC7.92□□□□□ -1.14
SLC1A1P43005 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SLC1A1P43005 UBE2U-206ENST00000611228 1550 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
SLC1A1P43005 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
SLC1A1P43005 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC7.92□□□□□ -1.14
SLC1A1P43005 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SLC1A1P43005 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SLC1A1P43005 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.92□□□□□ -1.14
SLC1A1P43005 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SLC1A1P43005 AC016722.2-201ENST00000429761 1835 ntTSL 2 BASIC7.92□□□□□ -1.14
SLC1A1P43005 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SLC1A1P43005 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SLC1A1P43005 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
SLC1A1P43005 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SLC1A1P43005 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.91□□□□□ -1.14
SLC1A1P43005 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SLC1A1P43005 C2orf80-201ENST00000341287 1238 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SLC1A1P43005 IGLV3-32-201ENST00000390303 383 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
SLC1A1P43005 AC127537.1-201ENST00000418183 748 ntBASIC7.91□□□□□ -1.14
SLC1A1P43005 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC7.91□□□□□ -1.14
SLC1A1P43005 AL445193.2-201ENST00000419596 620 ntTSL 3 BASIC7.91□□□□□ -1.14
SLC1A1P43005 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC7.91□□□□□ -1.14
SLC1A1P43005 IGKV1OR2-2-201ENST00000451163 355 ntBASIC7.91□□□□□ -1.14
SLC1A1P43005 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC7.91□□□□□ -1.14
SLC1A1P43005 RN7SL89P-201ENST00000480252 283 ntBASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms