Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 NOS1-203ENST00000344089 4340 ntTSL 5 BASIC9.68□□□□□ -0.86
ALDH1A1P00352 HIVEP2-203ENST00000367604 10032 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
ALDH1A1P00352 C8orf48-201ENST00000297324 1445 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
ALDH1A1P00352 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
ALDH1A1P00352 AC109826.1-201ENST00000419865 1424 ntTSL 5 BASIC9.68□□□□□ -0.86
ALDH1A1P00352 AP000705.2-201ENST00000433524 1386 ntBASIC9.68□□□□□ -0.86
ALDH1A1P00352 FAM161B-201ENST00000286544 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
ALDH1A1P00352 SLC12A6-203ENST00000397702 4096 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
ALDH1A1P00352 PHTF2-205ENST00000416283 5198 ntTSL 5 BASIC9.68□□□□□ -0.86
ALDH1A1P00352 SERPINB12-201ENST00000269491 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
ALDH1A1P00352 PSG9-203ENST00000291752 1055 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
ALDH1A1P00352 MAJIN-201ENST00000301896 843 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
ALDH1A1P00352 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
ALDH1A1P00352 CLEC2A-201ENST00000339766 732 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
ALDH1A1P00352 PSMD10-203ENST00000340200 713 ntTSL 3 BASIC9.68□□□□□ -0.86
ALDH1A1P00352 SMARCA2-205ENST00000382183 1178 ntTSL 5 BASIC9.68□□□□□ -0.86
ALDH1A1P00352 MIR185-201ENST00000385288 82 ntBASIC9.68□□□□□ -0.86
ALDH1A1P00352 PHBP1-201ENST00000392260 808 ntBASIC9.68□□□□□ -0.86
ALDH1A1P00352 CASP8-208ENST00000392266 1283 ntTSL 2 BASIC9.68□□□□□ -0.86
ALDH1A1P00352 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
ALDH1A1P00352 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC9.68□□□□□ -0.86
ALDH1A1P00352 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
ALDH1A1P00352 AC020983.1-201ENST00000417063 543 ntBASIC9.68□□□□□ -0.86
ALDH1A1P00352 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC9.68□□□□□ -0.86
ALDH1A1P00352 LINC01392-201ENST00000419883 565 ntTSL 5 BASIC9.68□□□□□ -0.86
ALDH1A1P00352 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC9.68□□□□□ -0.86
ALDH1A1P00352 CDKN2B-AS1-203ENST00000428597 3835 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
ALDH1A1P00352 MRPS10P2-201ENST00000431226 381 ntBASIC9.68□□□□□ -0.86
ALDH1A1P00352 MIR4435-2HG-205ENST00000431385 843 ntTSL 3 BASIC9.68□□□□□ -0.86
ALDH1A1P00352 PIGCP2-201ENST00000433617 835 ntBASIC9.68□□□□□ -0.86
ALDH1A1P00352 MTCO2P16-201ENST00000436962 677 ntBASIC9.68□□□□□ -0.86
ALDH1A1P00352 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
ALDH1A1P00352 OR10R1P-201ENST00000441524 1141 ntBASIC9.68□□□□□ -0.86
ALDH1A1P00352 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
ALDH1A1P00352 AC092754.2-201ENST00000463506 460 ntBASIC9.68□□□□□ -0.86
ALDH1A1P00352 RN7SL740P-201ENST00000467060 344 ntBASIC9.68□□□□□ -0.86
ALDH1A1P00352 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC9.68□□□□□ -0.86
ALDH1A1P00352 FNIP1-203ENST00000510461 3845 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
ALDH1A1P00352 LINC01438-201ENST00000512794 556 ntTSL 4 BASIC9.68□□□□□ -0.86
ALDH1A1P00352 SNORA3.4-201ENST00000515969 96 ntBASIC9.68□□□□□ -0.86
ALDH1A1P00352 RNU6-276P-201ENST00000516114 96 ntBASIC9.68□□□□□ -0.86
ALDH1A1P00352 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC9.68□□□□□ -0.86
ALDH1A1P00352 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
ALDH1A1P00352 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC9.68□□□□□ -0.86
ALDH1A1P00352 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC9.68□□□□□ -0.86
ALDH1A1P00352 AC091304.4-201ENST00000565703 620 ntBASIC9.68□□□□□ -0.86
ALDH1A1P00352 AC093826.2-201ENST00000579042 108 ntBASIC9.68□□□□□ -0.86
ALDH1A1P00352 OR1X1P-201ENST00000606159 931 ntBASIC9.68□□□□□ -0.86
ALDH1A1P00352 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC9.68□□□□□ -0.86
ALDH1A1P00352 PTCHD3P1-201ENST00000612350 537 ntBASIC9.68□□□□□ -0.86
ALDH1A1P00352 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC9.68□□□□□ -0.86
ALDH1A1P00352 RN7SL301P-202ENST00000618767 298 ntBASIC9.68□□□□□ -0.86
ALDH1A1P00352 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC9.68□□□□□ -0.86
ALDH1A1P00352 LAMA3-207ENST00000587184 5007 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
ALDH1A1P00352 CSTF1-201ENST00000217109 4290 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
ALDH1A1P00352 DNAH1-201ENST00000420323 13104 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
ALDH1A1P00352 DPP9-203ENST00000594671 3851 ntTSL 5 BASIC9.68□□□□□ -0.86
ALDH1A1P00352 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
ALDH1A1P00352 Z95114.3-201ENST00000624395 1921 ntBASIC9.68□□□□□ -0.86
ALDH1A1P00352 KIAA1217-207ENST00000396445 5706 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
ALDH1A1P00352 SRP19-204ENST00000505459 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
ALDH1A1P00352 AC068512.1-201ENST00000584542 1811 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
ALDH1A1P00352 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 TP63-204ENST00000392460 1668 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
ALDH1A1P00352 AC004862.1-209ENST00000437763 1678 ntTSL 5 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 C7orf55-LUC7L2-201ENST00000541515 1661 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 PALM2-AKAP2-202ENST00000374530 7507 ntTSL 2 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 GEMIN6-201ENST00000281950 3728 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
ALDH1A1P00352 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
ALDH1A1P00352 CYP39A1-201ENST00000275016 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
ALDH1A1P00352 ITIH2-202ENST00000379587 2848 ntTSL 5 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 AP003027.1-202ENST00000366160 2076 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 AL161725.1-201ENST00000591577 1351 ntTSL 5 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 ZNF443-201ENST00000301547 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
ALDH1A1P00352 KYNUP2-201ENST00000582280 1329 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 KCNMB3-205ENST00000485523 7246 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
ALDH1A1P00352 TNPO3-203ENST00000471234 3283 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
ALDH1A1P00352 GOLGA6D-202ENST00000618219 3210 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 AC090241.3-201ENST00000621730 2599 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 OR4D6-201ENST00000300127 1054 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 RPL7A-201ENST00000315731 680 ntTSL 2 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 RNA5SP483-201ENST00000363431 118 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 SLC25A5P7-201ENST00000406156 896 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 RNU6ATAC25P-201ENST00000408798 117 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
ALDH1A1P00352 RPS6KA2-IT1-201ENST00000416770 579 ntTSL 3 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 AC019181.1-201ENST00000417151 310 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 MTND4LP13-201ENST00000425022 298 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 LINC02088-201ENST00000428134 620 ntTSL 3 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 AC084290.1-201ENST00000434995 374 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 ASS1P5-201ENST00000435496 1239 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 SNX18P9-201ENST00000440580 835 ntBASIC9.67□□□□□ -0.86
ALDH1A1P00352 GGT3P-203ENST00000445651 368 ntTSL 2 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC9.67□□□□□ -0.86
ALDH1A1P00352 AL157714.2-204ENST00000452283 973 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms