Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 KIF13A-204ENST00000378826 5747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
COL15A1P39059 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
COL15A1P39059 INSR-202ENST00000341500 8954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
COL15A1P39059 FSHR-201ENST00000304421 2176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
COL15A1P39059 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
COL15A1P39059 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
COL15A1P39059 SEMA5A-201ENST00000382496 11762 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
COL15A1P39059 EEF1A1P28-201ENST00000450915 1403 ntBASIC9.58□□□□□ -0.88
COL15A1P39059 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
COL15A1P39059 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC9.58□□□□□ -0.88
COL15A1P39059 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
COL15A1P39059 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
COL15A1P39059 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
COL15A1P39059 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC9.58□□□□□ -0.88
COL15A1P39059 SEMA3C-203ENST00000419255 2415 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
COL15A1P39059 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
COL15A1P39059 AL450313.1-201ENST00000366376 452 ntTSL 3 BASIC9.58□□□□□ -0.88
COL15A1P39059 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
COL15A1P39059 RPSAP72-201ENST00000407020 358 ntBASIC9.58□□□□□ -0.88
COL15A1P39059 AL355862.1-201ENST00000412705 353 ntBASIC9.58□□□□□ -0.88
COL15A1P39059 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC9.58□□□□□ -0.88
COL15A1P39059 RPS10P14-201ENST00000440748 502 ntBASIC9.58□□□□□ -0.88
COL15A1P39059 AC009244.1-201ENST00000450566 258 ntBASIC9.58□□□□□ -0.88
COL15A1P39059 AK6-203ENST00000502819 743 ntTSL 5 BASIC9.58□□□□□ -0.88
COL15A1P39059 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC9.58□□□□□ -0.88
COL15A1P39059 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC9.58□□□□□ -0.88
COL15A1P39059 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC9.58□□□□□ -0.88
COL15A1P39059 NDUFA3P2-201ENST00000531434 232 ntBASIC9.58□□□□□ -0.88
COL15A1P39059 AP006587.5-201ENST00000532033 739 ntBASIC9.58□□□□□ -0.88
COL15A1P39059 MIR4800-201ENST00000537353 80 ntBASIC9.58□□□□□ -0.88
COL15A1P39059 AC126177.6-201ENST00000550420 1009 ntBASIC9.58□□□□□ -0.88
COL15A1P39059 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC9.58□□□□□ -0.88
COL15A1P39059 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC9.58□□□□□ -0.88
COL15A1P39059 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC9.58□□□□□ -0.88
COL15A1P39059 AL137802.2-201ENST00000562878 1110 ntBASIC9.58□□□□□ -0.88
COL15A1P39059 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC9.58□□□□□ -0.88
COL15A1P39059 ACTG1P22-201ENST00000603793 1099 ntBASIC9.58□□□□□ -0.88
COL15A1P39059 AL096855.2-201ENST00000605785 369 ntBASIC9.58□□□□□ -0.88
COL15A1P39059 AL139317.4-201ENST00000605879 760 ntBASIC9.58□□□□□ -0.88
COL15A1P39059 HTR1DP1-201ENST00000616500 888 ntBASIC9.58□□□□□ -0.88
COL15A1P39059 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC9.58□□□□□ -0.88
COL15A1P39059 AC233280.20-201ENST00000637412 416 ntBASIC9.58□□□□□ -0.88
COL15A1P39059 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
COL15A1P39059 LINC01747-203ENST00000634603 1377 ntTSL 4 BASIC9.58□□□□□ -0.88
COL15A1P39059 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC9.58□□□□□ -0.88
COL15A1P39059 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC9.58□□□□□ -0.88
COL15A1P39059 DCAF4L2-201ENST00000319675 3326 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
COL15A1P39059 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
COL15A1P39059 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
COL15A1P39059 ARHGAP42P2-201ENST00000416089 2140 ntBASIC9.58□□□□□ -0.88
COL15A1P39059 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC9.57□□□□□ -0.88
COL15A1P39059 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC9.57□□□□□ -0.88
COL15A1P39059 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
COL15A1P39059 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
COL15A1P39059 RFX4-202ENST00000357881 2565 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
COL15A1P39059 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
COL15A1P39059 HM13-224ENST00000498035 3932 ntTSL 2 BASIC9.57□□□□□ -0.88
COL15A1P39059 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
COL15A1P39059 SYNJ1-211ENST00000630077 6898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
COL15A1P39059 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC9.57□□□□□ -0.88
COL15A1P39059 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
COL15A1P39059 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
COL15A1P39059 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
COL15A1P39059 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
COL15A1P39059 RNU4-81P-201ENST00000363561 144 ntBASIC9.57□□□□□ -0.88
COL15A1P39059 AL451061.1-201ENST00000407887 862 ntBASIC9.57□□□□□ -0.88
COL15A1P39059 EIF4A1P2-201ENST00000422633 1220 ntBASIC9.57□□□□□ -0.88
COL15A1P39059 AL022324.2-201ENST00000434827 780 ntBASIC9.57□□□□□ -0.88
COL15A1P39059 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC9.57□□□□□ -0.88
COL15A1P39059 RN7SL392P-201ENST00000473024 299 ntBASIC9.57□□□□□ -0.88
COL15A1P39059 EIF4E2P2-201ENST00000492033 736 ntBASIC9.57□□□□□ -0.88
COL15A1P39059 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC9.57□□□□□ -0.88
COL15A1P39059 DCN-215ENST00000550099 719 ntTSL 2 BASIC9.57□□□□□ -0.88
COL15A1P39059 LINC00520-206ENST00000560336 883 ntTSL 3 BASIC9.57□□□□□ -0.88
COL15A1P39059 AC005479.3-201ENST00000602790 431 ntBASIC9.57□□□□□ -0.88
COL15A1P39059 U47924.1-201ENST00000606539 434 ntBASIC9.57□□□□□ -0.88
COL15A1P39059 U91328.4-201ENST00000608919 517 ntBASIC9.57□□□□□ -0.88
COL15A1P39059 AC073488.8-201ENST00000631952 757 ntBASIC9.57□□□□□ -0.88
COL15A1P39059 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC9.57□□□□□ -0.88
COL15A1P39059 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
COL15A1P39059 AC011008.2-201ENST00000624866 3352 ntBASIC9.57□□□□□ -0.88
COL15A1P39059 UGT2B7-205ENST00000622664 1532 ntTSL 5 BASIC9.57□□□□□ -0.88
COL15A1P39059 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
COL15A1P39059 EIF4BP4-201ENST00000441847 1780 ntBASIC9.56□□□□□ -0.88
COL15A1P39059 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
COL15A1P39059 FPR3-202ENST00000595991 2222 ntAPPRIS P1 TSL 4 BASIC9.56□□□□□ -0.88
COL15A1P39059 SETBP1-201ENST00000282030 9899 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
COL15A1P39059 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC9.56□□□□□ -0.88
COL15A1P39059 CALML4-203ENST00000395465 4155 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
COL15A1P39059 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC9.56□□□□□ -0.88
COL15A1P39059 DDX10P2-201ENST00000417796 2614 ntBASIC9.56□□□□□ -0.88
COL15A1P39059 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC9.56□□□□□ -0.88
COL15A1P39059 AC110998.1-201ENST00000519029 2053 ntBASIC9.56□□□□□ -0.88
COL15A1P39059 ZNF713-206ENST00000633730 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
COL15A1P39059 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
COL15A1P39059 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
COL15A1P39059 RPS3AP5-201ENST00000389400 821 ntBASIC9.56□□□□□ -0.88
COL15A1P39059 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
COL15A1P39059 FTH1P5-201ENST00000425761 545 ntBASIC9.56□□□□□ -0.88
COL15A1P39059 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms