Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 UBE2V2-207ENST00000523111 4373 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM48Q8IWZ4 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM48Q8IWZ4 ZNF225-206ENST00000592780 2538 ntTSL 5 BASIC7.85□□□□□ -1.15
TRIM48Q8IWZ4 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM48Q8IWZ4 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
TRIM48Q8IWZ4 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 AC007066.2-201ENST00000561961 1993 ntTSL 2 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 AC098657.2-201ENST00000567886 1976 ntBASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 CD274-202ENST00000381577 3644 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 TBX5-AS1-201ENST00000528549 3620 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 AL049646.1-201ENST00000457009 2490 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 RPL7P13-201ENST00000415103 741 ntBASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 AC012594.1-235ENST00000424391 727 ntTSL 5 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 GYG1P2-201ENST00000426437 1006 ntBASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 C2orf74-202ENST00000426997 879 ntAPPRIS P2 TSL 3 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 AL590623.1-201ENST00000427864 105 ntBASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 EIF4A1P10-201ENST00000428832 1216 ntBASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 DNAJA1P6-201ENST00000437347 354 ntBASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 AC097358.1-201ENST00000438827 582 ntBASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 AL606517.1-201ENST00000446914 387 ntBASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 AC096543.2-201ENST00000449140 859 ntTSL 3 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 KDM4A-AS1-205ENST00000453015 647 ntTSL 2 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 AF186996.1-201ENST00000466578 1015 ntBASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 RN7SL201P-201ENST00000482306 296 ntBASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 AC116353.1-201ENST00000489727 316 ntBASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 AL449212.1-201ENST00000499853 517 ntBASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 NTAN1P2-201ENST00000515730 940 ntBASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 RN7SKP14-201ENST00000516000 329 ntBASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 AC022826.1-201ENST00000519383 805 ntBASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 EIF4A2P3-201ENST00000525903 1055 ntBASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 AC053513.1-201ENST00000543604 738 ntTSL 3 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 GNPTAB-203ENST00000549165 373 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 LINC02318-202ENST00000556346 715 ntTSL 3 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 AC136944.5-201ENST00000573021 151 ntBASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 MIR3689C-201ENST00000581239 72 ntBASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 AP001442.1-201ENST00000617755 659 ntTSL 5 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 AC245028.3-201ENST00000618197 285 ntBASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 AC244093.5-201ENST00000619606 718 ntTSL 4 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 CTSLP2-202ENST00000626319 1104 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 SLC8A1-AS1-228ENST00000627210 225 ntTSL 5 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 LINC01125-248ENST00000627284 700 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 AC012594.1-254ENST00000628002 438 ntTSL 5 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 AC119674.1-221ENST00000641594 1213 ntBASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 CNTRL-212ENST00000613863 2418 ntTSL 5 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 AL139811.2-201ENST00000373465 1630 ntBASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 CACNB2-201ENST00000282343 3524 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 DCAF4L2-201ENST00000319675 3326 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 DNAH9-215ENST00000608377 3147 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
TRIM48Q8IWZ4 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
TRIM48Q8IWZ4 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC7.84□□□□□ -1.16
TRIM48Q8IWZ4 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.84□□□□□ -1.16
TRIM48Q8IWZ4 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.16
TRIM48Q8IWZ4 MMGT1-201ENST00000305963 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TRIM48Q8IWZ4 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
TRIM48Q8IWZ4 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
TRIM48Q8IWZ4 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
TRIM48Q8IWZ4 CDC27-201ENST00000066544 5801 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
TRIM48Q8IWZ4 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC7.83□□□□□ -1.16
TRIM48Q8IWZ4 LHFPL3-AS2-202ENST00000631061 1832 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
TRIM48Q8IWZ4 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
TRIM48Q8IWZ4 MS4A2-201ENST00000278888 1152 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TRIM48Q8IWZ4 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
TRIM48Q8IWZ4 OR4D6-201ENST00000300127 1054 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
TRIM48Q8IWZ4 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
TRIM48Q8IWZ4 FAM177B-201ENST00000360827 764 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
TRIM48Q8IWZ4 SNORA71D-201ENST00000363484 134 ntBASIC7.83□□□□□ -1.16
TRIM48Q8IWZ4 GLRX3P2-201ENST00000405027 1038 ntBASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms