Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 AC090164.3-201ENST00000610780 2143 ntBASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 CROCCP3-202ENST00000420820 1947 ntBASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 BICD1-207ENST00000551848 1962 ntBASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 LBX2-AS1-202ENST00000603175 2083 ntBASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
LINC01558Q9Y6Z2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01558Q9Y6Z2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC10.47□□□□□ -0.73
LINC01558Q9Y6Z2 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01558Q9Y6Z2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
LINC01558Q9Y6Z2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01558Q9Y6Z2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
LINC01558Q9Y6Z2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
LINC01558Q9Y6Z2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC10.47□□□□□ -0.73
LINC01558Q9Y6Z2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC10.47□□□□□ -0.73
LINC01558Q9Y6Z2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01558Q9Y6Z2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01558Q9Y6Z2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
LINC01558Q9Y6Z2 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC10.47□□□□□ -0.73
LINC01558Q9Y6Z2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01558Q9Y6Z2 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01558Q9Y6Z2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01558Q9Y6Z2 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01558Q9Y6Z2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01558Q9Y6Z2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01558Q9Y6Z2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC10.47□□□□□ -0.73
LINC01558Q9Y6Z2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01558Q9Y6Z2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
LINC01558Q9Y6Z2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01558Q9Y6Z2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01558Q9Y6Z2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01558Q9Y6Z2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC10.46□□□□□ -0.73
LINC01558Q9Y6Z2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC01558Q9Y6Z2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC10.46□□□□□ -0.73
LINC01558Q9Y6Z2 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC10.46□□□□□ -0.73
LINC01558Q9Y6Z2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC01558Q9Y6Z2 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
LINC01558Q9Y6Z2 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC10.46□□□□□ -0.73
LINC01558Q9Y6Z2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC10.46□□□□□ -0.73
LINC01558Q9Y6Z2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
LINC01558Q9Y6Z2 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC01558Q9Y6Z2 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC01558Q9Y6Z2 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.73
LINC01558Q9Y6Z2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC10.46□□□□□ -0.73
LINC01558Q9Y6Z2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01558Q9Y6Z2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01558Q9Y6Z2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC10.46□□□□□ -0.74
LINC01558Q9Y6Z2 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01558Q9Y6Z2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC10.46□□□□□ -0.74
LINC01558Q9Y6Z2 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC10.46□□□□□ -0.74
LINC01558Q9Y6Z2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01558Q9Y6Z2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01558Q9Y6Z2 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01558Q9Y6Z2 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01558Q9Y6Z2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01558Q9Y6Z2 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01558Q9Y6Z2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.74
LINC01558Q9Y6Z2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01558Q9Y6Z2 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01558Q9Y6Z2 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01558Q9Y6Z2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01558Q9Y6Z2 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 AL162727.3-201ENST00000635661 2787 ntBASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01558Q9Y6Z2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms