Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 UNC93B2-201ENST00000285383 730 ntBASIC31.25■■■□□ 2.59
CDK11AQ9UQ88 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC31.25■■■□□ 2.59
CDK11AQ9UQ88 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC31.25■■■□□ 2.59
CDK11AQ9UQ88 RN7SL850P-201ENST00000579959 291 ntBASIC31.25■■■□□ 2.59
CDK11AQ9UQ88 REXO1L10P-201ENST00000615707 1290 ntBASIC31.25■■■□□ 2.59
CDK11AQ9UQ88 GLDC-219ENST00000640208 420 ntTSL 2 BASIC31.25■■■□□ 2.59
CDK11AQ9UQ88 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CDK11AQ9UQ88 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC31.25■■■□□ 2.59
CDK11AQ9UQ88 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CDK11AQ9UQ88 PTBP1P-201ENST00000554374 1601 ntBASIC31.24■■■□□ 2.59
CDK11AQ9UQ88 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC31.24■■■□□ 2.59
CDK11AQ9UQ88 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CDK11AQ9UQ88 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CDK11AQ9UQ88 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
CDK11AQ9UQ88 AC079598.2-202ENST00000546624 1451 ntBASIC31.23■■■□□ 2.59
CDK11AQ9UQ88 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
CDK11AQ9UQ88 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC31.23■■■□□ 2.59
CDK11AQ9UQ88 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC31.23■■■□□ 2.59
CDK11AQ9UQ88 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC31.23■■■□□ 2.59
CDK11AQ9UQ88 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC31.23■■■□□ 2.59
CDK11AQ9UQ88 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC31.23■■■□□ 2.59
CDK11AQ9UQ88 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC31.23■■■□□ 2.59
CDK11AQ9UQ88 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC31.23■■■□□ 2.59
CDK11AQ9UQ88 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CDK11AQ9UQ88 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CDK11AQ9UQ88 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
CDK11AQ9UQ88 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC31.22■■■□□ 2.59
CDK11AQ9UQ88 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
CDK11AQ9UQ88 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
CDK11AQ9UQ88 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CDK11AQ9UQ88 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC31.22■■■□□ 2.59
CDK11AQ9UQ88 MIR6786-201ENST00000616843 113 ntBASIC31.22■■■□□ 2.59
CDK11AQ9UQ88 AC092865.7-201ENST00000641832 219 ntBASIC31.22■■■□□ 2.59
CDK11AQ9UQ88 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CDK11AQ9UQ88 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CDK11AQ9UQ88 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CDK11AQ9UQ88 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CDK11AQ9UQ88 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
CDK11AQ9UQ88 Z98882.1-201ENST00000622160 2253 ntBASIC31.22■■■□□ 2.59
CDK11AQ9UQ88 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC31.22■■■□□ 2.59
CDK11AQ9UQ88 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC31.21■■■□□ 2.59
CDK11AQ9UQ88 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC31.21■■■□□ 2.59
CDK11AQ9UQ88 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CDK11AQ9UQ88 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CDK11AQ9UQ88 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CDK11AQ9UQ88 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC31.21■■■□□ 2.59
CDK11AQ9UQ88 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CDK11AQ9UQ88 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CDK11AQ9UQ88 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC31.21■■■□□ 2.59
CDK11AQ9UQ88 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
CDK11AQ9UQ88 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CDK11AQ9UQ88 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC31.2■■■□□ 2.59
CDK11AQ9UQ88 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
CDK11AQ9UQ88 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CDK11AQ9UQ88 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC31.2■■■□□ 2.59
CDK11AQ9UQ88 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
CDK11AQ9UQ88 AC121338.2-201ENST00000622535 1744 ntBASIC31.2■■■□□ 2.58
CDK11AQ9UQ88 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.58
CDK11AQ9UQ88 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
CDK11AQ9UQ88 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
CDK11AQ9UQ88 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CDK11AQ9UQ88 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CDK11AQ9UQ88 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC31.19■■■□□ 2.58
CDK11AQ9UQ88 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CDK11AQ9UQ88 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
CDK11AQ9UQ88 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CDK11AQ9UQ88 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
CDK11AQ9UQ88 KSR1P1-201ENST00000446298 240 ntBASIC31.19■■■□□ 2.58
CDK11AQ9UQ88 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC31.19■■■□□ 2.58
CDK11AQ9UQ88 AC116562.2-201ENST00000507042 360 ntBASIC31.19■■■□□ 2.58
CDK11AQ9UQ88 CBFB-203ENST00000561924 584 ntTSL 5 BASIC31.19■■■□□ 2.58
CDK11AQ9UQ88 AL445228.2-201ENST00000605589 952 ntBASIC31.19■■■□□ 2.58
CDK11AQ9UQ88 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CDK11AQ9UQ88 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
CDK11AQ9UQ88 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CDK11AQ9UQ88 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
CDK11AQ9UQ88 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CDK11AQ9UQ88 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC31.19■■■□□ 2.58
CDK11AQ9UQ88 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CDK11AQ9UQ88 KRT8P20-201ENST00000423953 1409 ntBASIC31.18■■■□□ 2.58
CDK11AQ9UQ88 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC31.18■■■□□ 2.58
CDK11AQ9UQ88 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CDK11AQ9UQ88 NIFKP9-201ENST00000419265 221 ntBASIC31.18■■■□□ 2.58
CDK11AQ9UQ88 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC31.18■■■□□ 2.58
CDK11AQ9UQ88 AL031963.3-201ENST00000606441 850 ntBASIC31.18■■■□□ 2.58
CDK11AQ9UQ88 AP000525.1-201ENST00000608286 694 ntBASIC31.18■■■□□ 2.58
CDK11AQ9UQ88 AC005363.2-201ENST00000618631 242 ntBASIC31.18■■■□□ 2.58
CDK11AQ9UQ88 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC31.18■■■□□ 2.58
CDK11AQ9UQ88 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CDK11AQ9UQ88 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CDK11AQ9UQ88 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
CDK11AQ9UQ88 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CDK11AQ9UQ88 AL049796.1-201ENST00000565336 1766 ntBASIC31.17■■■□□ 2.58
CDK11AQ9UQ88 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC31.17■■■□□ 2.58
CDK11AQ9UQ88 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC31.17■■■□□ 2.58
CDK11AQ9UQ88 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC31.17■■■□□ 2.58
CDK11AQ9UQ88 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC31.17■■■□□ 2.58
CDK11AQ9UQ88 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC31.17■■■□□ 2.58
CDK11AQ9UQ88 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CDK11AQ9UQ88 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms