Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC22.86■■□□□ 1.25
COL20A1Q9P218 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
COL20A1Q9P218 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC22.86■■□□□ 1.25
COL20A1Q9P218 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.85■■□□□ 1.25
COL20A1Q9P218 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
COL20A1Q9P218 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL20A1Q9P218 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL20A1Q9P218 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL20A1Q9P218 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
COL20A1Q9P218 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC22.85■■□□□ 1.25
COL20A1Q9P218 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
COL20A1Q9P218 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
COL20A1Q9P218 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.85■■□□□ 1.25
COL20A1Q9P218 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
COL20A1Q9P218 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC22.85■■□□□ 1.25
COL20A1Q9P218 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC22.85■■□□□ 1.25
COL20A1Q9P218 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC22.85■■□□□ 1.25
COL20A1Q9P218 AC110285.5-201ENST00000611501 352 ntBASIC22.85■■□□□ 1.25
COL20A1Q9P218 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
COL20A1Q9P218 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC22.85■■□□□ 1.25
COL20A1Q9P218 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.85■■□□□ 1.25
COL20A1Q9P218 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC22.85■■□□□ 1.25
COL20A1Q9P218 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
COL20A1Q9P218 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC22.85■■□□□ 1.25
COL20A1Q9P218 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL20A1Q9P218 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC22.84■■□□□ 1.25
COL20A1Q9P218 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL20A1Q9P218 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL20A1Q9P218 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL20A1Q9P218 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL20A1Q9P218 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL20A1Q9P218 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC22.84■■□□□ 1.25
COL20A1Q9P218 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL20A1Q9P218 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
COL20A1Q9P218 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC22.84■■□□□ 1.25
COL20A1Q9P218 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC22.84■■□□□ 1.25
COL20A1Q9P218 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
COL20A1Q9P218 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.84■■□□□ 1.25
COL20A1Q9P218 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
COL20A1Q9P218 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
COL20A1Q9P218 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL20A1Q9P218 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL20A1Q9P218 DPP3P2-201ENST00000416030 1696 ntBASIC22.84■■□□□ 1.25
COL20A1Q9P218 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL20A1Q9P218 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.83■■□□□ 1.25
COL20A1Q9P218 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC22.83■■□□□ 1.25
COL20A1Q9P218 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
COL20A1Q9P218 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.25
COL20A1Q9P218 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC22.83■■□□□ 1.25
COL20A1Q9P218 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC22.83■■□□□ 1.25
COL20A1Q9P218 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
COL20A1Q9P218 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC22.83■■□□□ 1.25
COL20A1Q9P218 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
COL20A1Q9P218 AL031963.3-201ENST00000606441 850 ntBASIC22.83■■□□□ 1.25
COL20A1Q9P218 AL121829.2-201ENST00000620908 328 ntBASIC22.83■■□□□ 1.25
COL20A1Q9P218 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC22.83■■□□□ 1.25
COL20A1Q9P218 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
COL20A1Q9P218 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC22.83■■□□□ 1.24
COL20A1Q9P218 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC22.83■■□□□ 1.24
COL20A1Q9P218 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC22.82■■□□□ 1.24
COL20A1Q9P218 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL20A1Q9P218 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL20A1Q9P218 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL20A1Q9P218 AL137060.1-201ENST00000618151 2648 ntBASIC22.82■■□□□ 1.24
COL20A1Q9P218 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
COL20A1Q9P218 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
COL20A1Q9P218 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
COL20A1Q9P218 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.82■■□□□ 1.24
COL20A1Q9P218 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL20A1Q9P218 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
COL20A1Q9P218 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
COL20A1Q9P218 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.82■■□□□ 1.24
COL20A1Q9P218 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL20A1Q9P218 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
COL20A1Q9P218 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL20A1Q9P218 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL20A1Q9P218 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL20A1Q9P218 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC22.81■■□□□ 1.24
COL20A1Q9P218 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL20A1Q9P218 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.81■■□□□ 1.24
COL20A1Q9P218 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC22.81■■□□□ 1.24
COL20A1Q9P218 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL20A1Q9P218 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL20A1Q9P218 MDFI-202ENST00000373050 809 ntTSL 2 BASIC22.81■■□□□ 1.24
COL20A1Q9P218 MIR718-201ENST00000390190 70 ntBASIC22.81■■□□□ 1.24
COL20A1Q9P218 SNORA78-201ENST00000459373 127 ntBASIC22.81■■□□□ 1.24
COL20A1Q9P218 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
COL20A1Q9P218 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
COL20A1Q9P218 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC22.81■■□□□ 1.24
COL20A1Q9P218 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
COL20A1Q9P218 KRT8P20-201ENST00000423953 1409 ntBASIC22.81■■□□□ 1.24
COL20A1Q9P218 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
COL20A1Q9P218 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC22.81■■□□□ 1.24
COL20A1Q9P218 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL20A1Q9P218 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL20A1Q9P218 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
COL20A1Q9P218 RPS2P55-201ENST00000397318 883 ntBASIC22.8■■□□□ 1.24
COL20A1Q9P218 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.8■■□□□ 1.24
COL20A1Q9P218 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
COL20A1Q9P218 AC107956.1-201ENST00000494359 873 ntBASIC22.8■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms