Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HACD3Q9P035 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HACD3Q9P035 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HACD3Q9P035 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HACD3Q9P035 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
HACD3Q9P035 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HACD3Q9P035 LINC01006-201ENST00000333319 2292 ntBASIC20.32■□□□□ 0.84
HACD3Q9P035 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HACD3Q9P035 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HACD3Q9P035 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HACD3Q9P035 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.32■□□□□ 0.84
HACD3Q9P035 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HACD3Q9P035 BX276092.2-201ENST00000417668 665 ntBASIC20.32■□□□□ 0.84
HACD3Q9P035 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.32■□□□□ 0.84
HACD3Q9P035 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.32■□□□□ 0.84
HACD3Q9P035 TSPY6P-201ENST00000448518 926 ntBASIC20.32■□□□□ 0.84
HACD3Q9P035 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
HACD3Q9P035 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HACD3Q9P035 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.32■□□□□ 0.84
HACD3Q9P035 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
HACD3Q9P035 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HACD3Q9P035 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.32■□□□□ 0.84
HACD3Q9P035 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.32■□□□□ 0.84
HACD3Q9P035 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.32■□□□□ 0.84
HACD3Q9P035 KRT17P1-201ENST00000399211 1546 ntBASIC20.32■□□□□ 0.84
HACD3Q9P035 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HACD3Q9P035 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HACD3Q9P035 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
HACD3Q9P035 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.31■□□□□ 0.84
HACD3Q9P035 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
HACD3Q9P035 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HACD3Q9P035 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HACD3Q9P035 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
HACD3Q9P035 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.31■□□□□ 0.84
HACD3Q9P035 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HACD3Q9P035 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.31■□□□□ 0.84
HACD3Q9P035 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.31■□□□□ 0.84
HACD3Q9P035 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.31■□□□□ 0.84
HACD3Q9P035 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HACD3Q9P035 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.31■□□□□ 0.84
HACD3Q9P035 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.31■□□□□ 0.84
HACD3Q9P035 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HACD3Q9P035 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HACD3Q9P035 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
HACD3Q9P035 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.31■□□□□ 0.84
HACD3Q9P035 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HACD3Q9P035 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HACD3Q9P035 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HACD3Q9P035 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HACD3Q9P035 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
HACD3Q9P035 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.3■□□□□ 0.84
HACD3Q9P035 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.3■□□□□ 0.84
HACD3Q9P035 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.3■□□□□ 0.84
HACD3Q9P035 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HACD3Q9P035 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HACD3Q9P035 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HACD3Q9P035 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.3■□□□□ 0.84
HACD3Q9P035 MIPEPP3-201ENST00000412105 444 ntBASIC20.3■□□□□ 0.84
HACD3Q9P035 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
HACD3Q9P035 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.3■□□□□ 0.84
HACD3Q9P035 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.3■□□□□ 0.84
HACD3Q9P035 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.3■□□□□ 0.84
HACD3Q9P035 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.3■□□□□ 0.84
HACD3Q9P035 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HACD3Q9P035 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.3■□□□□ 0.84
HACD3Q9P035 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HACD3Q9P035 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HACD3Q9P035 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HACD3Q9P035 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.29■□□□□ 0.84
HACD3Q9P035 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HACD3Q9P035 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HACD3Q9P035 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HACD3Q9P035 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HACD3Q9P035 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HACD3Q9P035 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.29■□□□□ 0.84
HACD3Q9P035 GUSBP6-202ENST00000438529 1198 ntBASIC20.29■□□□□ 0.84
HACD3Q9P035 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.29■□□□□ 0.84
HACD3Q9P035 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.29■□□□□ 0.84
HACD3Q9P035 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.29■□□□□ 0.84
HACD3Q9P035 AC092118.2-201ENST00000613495 667 ntBASIC20.29■□□□□ 0.84
HACD3Q9P035 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
HACD3Q9P035 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.29■□□□□ 0.84
HACD3Q9P035 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
HACD3Q9P035 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HACD3Q9P035 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.29■□□□□ 0.84
HACD3Q9P035 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HACD3Q9P035 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HACD3Q9P035 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.28■□□□□ 0.84
HACD3Q9P035 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
HACD3Q9P035 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
HACD3Q9P035 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HACD3Q9P035 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.28■□□□□ 0.84
HACD3Q9P035 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HACD3Q9P035 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HACD3Q9P035 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HACD3Q9P035 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.28■□□□□ 0.84
HACD3Q9P035 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
HACD3Q9P035 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.28■□□□□ 0.84
HACD3Q9P035 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.28■□□□□ 0.84
HACD3Q9P035 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms