Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBP1Q9NZI7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBP1Q9NZI7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.5■□□□□ 0.87
UBP1Q9NZI7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
UBP1Q9NZI7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBP1Q9NZI7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBP1Q9NZI7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.5■□□□□ 0.87
UBP1Q9NZI7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.5■□□□□ 0.87
UBP1Q9NZI7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
UBP1Q9NZI7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
UBP1Q9NZI7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
UBP1Q9NZI7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
UBP1Q9NZI7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.49■□□□□ 0.87
UBP1Q9NZI7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UBP1Q9NZI7 MKRN4P-201ENST00000444706 1521 ntBASIC20.49■□□□□ 0.87
UBP1Q9NZI7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBP1Q9NZI7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBP1Q9NZI7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.49■□□□□ 0.87
UBP1Q9NZI7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.49■□□□□ 0.87
UBP1Q9NZI7 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.49■□□□□ 0.87
UBP1Q9NZI7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.49■□□□□ 0.87
UBP1Q9NZI7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBP1Q9NZI7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UBP1Q9NZI7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.49■□□□□ 0.87
UBP1Q9NZI7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.49■□□□□ 0.87
UBP1Q9NZI7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
UBP1Q9NZI7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBP1Q9NZI7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UBP1Q9NZI7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBP1Q9NZI7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBP1Q9NZI7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.48■□□□□ 0.87
UBP1Q9NZI7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBP1Q9NZI7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.48■□□□□ 0.87
UBP1Q9NZI7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.48■□□□□ 0.87
UBP1Q9NZI7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.48■□□□□ 0.87
UBP1Q9NZI7 AC083906.2-201ENST00000511578 360 ntBASIC20.48■□□□□ 0.87
UBP1Q9NZI7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
UBP1Q9NZI7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.48■□□□□ 0.87
UBP1Q9NZI7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
UBP1Q9NZI7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBP1Q9NZI7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBP1Q9NZI7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBP1Q9NZI7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBP1Q9NZI7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UBP1Q9NZI7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBP1Q9NZI7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBP1Q9NZI7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.48■□□□□ 0.87
UBP1Q9NZI7 AFG3L1P-217ENST00000557444 2447 ntBASIC20.47■□□□□ 0.87
UBP1Q9NZI7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBP1Q9NZI7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.47■□□□□ 0.87
UBP1Q9NZI7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBP1Q9NZI7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.47■□□□□ 0.87
UBP1Q9NZI7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
UBP1Q9NZI7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBP1Q9NZI7 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.47■□□□□ 0.87
UBP1Q9NZI7 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.47■□□□□ 0.87
UBP1Q9NZI7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.47■□□□□ 0.87
UBP1Q9NZI7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UBP1Q9NZI7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UBP1Q9NZI7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
UBP1Q9NZI7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.47■□□□□ 0.87
UBP1Q9NZI7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.47■□□□□ 0.87
UBP1Q9NZI7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBP1Q9NZI7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBP1Q9NZI7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
UBP1Q9NZI7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBP1Q9NZI7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
UBP1Q9NZI7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
UBP1Q9NZI7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBP1Q9NZI7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.46■□□□□ 0.87
UBP1Q9NZI7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
UBP1Q9NZI7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.46■□□□□ 0.87
UBP1Q9NZI7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.46■□□□□ 0.87
UBP1Q9NZI7 BX276092.2-201ENST00000417668 665 ntBASIC20.46■□□□□ 0.87
UBP1Q9NZI7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBP1Q9NZI7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.46■□□□□ 0.87
UBP1Q9NZI7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.46■□□□□ 0.87
UBP1Q9NZI7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.46■□□□□ 0.87
UBP1Q9NZI7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.46■□□□□ 0.87
UBP1Q9NZI7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBP1Q9NZI7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBP1Q9NZI7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.46■□□□□ 0.87
UBP1Q9NZI7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.46■□□□□ 0.87
UBP1Q9NZI7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBP1Q9NZI7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.87
UBP1Q9NZI7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBP1Q9NZI7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UBP1Q9NZI7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UBP1Q9NZI7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
UBP1Q9NZI7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBP1Q9NZI7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.45■□□□□ 0.86
UBP1Q9NZI7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBP1Q9NZI7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UBP1Q9NZI7 LSM12P1-201ENST00000411836 588 ntBASIC20.45■□□□□ 0.86
UBP1Q9NZI7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBP1Q9NZI7 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.45■□□□□ 0.86
UBP1Q9NZI7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.45■□□□□ 0.86
UBP1Q9NZI7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.45■□□□□ 0.86
UBP1Q9NZI7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.45■□□□□ 0.86
UBP1Q9NZI7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms