Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.97■□□□□ 0.47
PARPBPQ9NWS1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PARPBPQ9NWS1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PARPBPQ9NWS1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PARPBPQ9NWS1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PARPBPQ9NWS1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PARPBPQ9NWS1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
PARPBPQ9NWS1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PARPBPQ9NWS1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.96■□□□□ 0.47
PARPBPQ9NWS1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PARPBPQ9NWS1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.96■□□□□ 0.47
PARPBPQ9NWS1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.96■□□□□ 0.47
PARPBPQ9NWS1 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.96■□□□□ 0.47
PARPBPQ9NWS1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PARPBPQ9NWS1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PARPBPQ9NWS1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.96■□□□□ 0.47
PARPBPQ9NWS1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PARPBPQ9NWS1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.96■□□□□ 0.47
PARPBPQ9NWS1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PARPBPQ9NWS1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PARPBPQ9NWS1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PARPBPQ9NWS1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PARPBPQ9NWS1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PARPBPQ9NWS1 AC092720.2-201ENST00000602388 1665 ntBASIC17.96■□□□□ 0.47
PARPBPQ9NWS1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PARPBPQ9NWS1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PARPBPQ9NWS1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.96■□□□□ 0.46
PARPBPQ9NWS1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.46
PARPBPQ9NWS1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PARPBPQ9NWS1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PARPBPQ9NWS1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.95■□□□□ 0.46
PARPBPQ9NWS1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PARPBPQ9NWS1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.95■□□□□ 0.46
PARPBPQ9NWS1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PARPBPQ9NWS1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PARPBPQ9NWS1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.95■□□□□ 0.46
PARPBPQ9NWS1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.95■□□□□ 0.46
PARPBPQ9NWS1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PARPBPQ9NWS1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.95■□□□□ 0.46
PARPBPQ9NWS1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.95■□□□□ 0.46
PARPBPQ9NWS1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.95■□□□□ 0.46
PARPBPQ9NWS1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PARPBPQ9NWS1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.95■□□□□ 0.46
PARPBPQ9NWS1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.95■□□□□ 0.46
PARPBPQ9NWS1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
PARPBPQ9NWS1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PARPBPQ9NWS1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.95■□□□□ 0.46
PARPBPQ9NWS1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PARPBPQ9NWS1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PARPBPQ9NWS1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PARPBPQ9NWS1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PARPBPQ9NWS1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PARPBPQ9NWS1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PARPBPQ9NWS1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
PARPBPQ9NWS1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PARPBPQ9NWS1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.94■□□□□ 0.46
PARPBPQ9NWS1 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.94■□□□□ 0.46
PARPBPQ9NWS1 MYC-209ENST00000641252 345 ntBASIC17.94■□□□□ 0.46
PARPBPQ9NWS1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PARPBPQ9NWS1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PARPBPQ9NWS1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PARPBPQ9NWS1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.94■□□□□ 0.46
PARPBPQ9NWS1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.94■□□□□ 0.46
PARPBPQ9NWS1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PARPBPQ9NWS1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PARPBPQ9NWS1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PARPBPQ9NWS1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PARPBPQ9NWS1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PARPBPQ9NWS1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PARPBPQ9NWS1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PARPBPQ9NWS1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PARPBPQ9NWS1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PARPBPQ9NWS1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PARPBPQ9NWS1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PARPBPQ9NWS1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PARPBPQ9NWS1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.93■□□□□ 0.46
PARPBPQ9NWS1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PARPBPQ9NWS1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PARPBPQ9NWS1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PARPBPQ9NWS1 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.93■□□□□ 0.46
PARPBPQ9NWS1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.93■□□□□ 0.46
PARPBPQ9NWS1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PARPBPQ9NWS1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.93■□□□□ 0.46
PARPBPQ9NWS1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.93■□□□□ 0.46
PARPBPQ9NWS1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PARPBPQ9NWS1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms