Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
SLC52A1Q9NWF4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
SLC52A1Q9NWF4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC29.03■■■□□ 2.24
SLC52A1Q9NWF4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
SLC52A1Q9NWF4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
SLC52A1Q9NWF4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC29.03■■■□□ 2.24
SLC52A1Q9NWF4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC29.03■■■□□ 2.24
SLC52A1Q9NWF4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
SLC52A1Q9NWF4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC29.03■■■□□ 2.24
SLC52A1Q9NWF4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC29.03■■■□□ 2.24
SLC52A1Q9NWF4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC29.03■■■□□ 2.24
SLC52A1Q9NWF4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC29.02■■■□□ 2.24
SLC52A1Q9NWF4 AC244015.2-201ENST00000616358 1861 ntBASIC29.02■■■□□ 2.24
SLC52A1Q9NWF4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
SLC52A1Q9NWF4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
SLC52A1Q9NWF4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
SLC52A1Q9NWF4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC29.02■■■□□ 2.24
SLC52A1Q9NWF4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC29.02■■■□□ 2.24
SLC52A1Q9NWF4 KRT18P57-201ENST00000443599 1254 ntBASIC29.02■■■□□ 2.24
SLC52A1Q9NWF4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
SLC52A1Q9NWF4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC29.02■■■□□ 2.24
SLC52A1Q9NWF4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC29.02■■■□□ 2.24
SLC52A1Q9NWF4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC29.02■■■□□ 2.24
SLC52A1Q9NWF4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC29.02■■■□□ 2.24
SLC52A1Q9NWF4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC29.02■■■□□ 2.24
SLC52A1Q9NWF4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC29.02■■■□□ 2.24
SLC52A1Q9NWF4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC29.02■■■□□ 2.24
SLC52A1Q9NWF4 AC233723.2-201ENST00000623798 2106 ntBASIC29.02■■■□□ 2.24
SLC52A1Q9NWF4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
SLC52A1Q9NWF4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
SLC52A1Q9NWF4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC29.01■■■□□ 2.24
SLC52A1Q9NWF4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC29.01■■■□□ 2.24
SLC52A1Q9NWF4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
SLC52A1Q9NWF4 AL137013.1-201ENST00000432946 1228 ntBASIC29.01■■■□□ 2.23
SLC52A1Q9NWF4 SLC25A3P1-201ENST00000443844 931 ntBASIC29.01■■■□□ 2.23
SLC52A1Q9NWF4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC29.01■■■□□ 2.23
SLC52A1Q9NWF4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
SLC52A1Q9NWF4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC29.01■■■□□ 2.23
SLC52A1Q9NWF4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
SLC52A1Q9NWF4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
SLC52A1Q9NWF4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC29.01■■■□□ 2.23
SLC52A1Q9NWF4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
SLC52A1Q9NWF4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
SLC52A1Q9NWF4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
SLC52A1Q9NWF4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC29■■■□□ 2.23
SLC52A1Q9NWF4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC29■■■□□ 2.23
SLC52A1Q9NWF4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC29■■■□□ 2.23
SLC52A1Q9NWF4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC29■■■□□ 2.23
SLC52A1Q9NWF4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC29■■■□□ 2.23
SLC52A1Q9NWF4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC29■■■□□ 2.23
SLC52A1Q9NWF4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC29■■■□□ 2.23
SLC52A1Q9NWF4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC28.99■■■□□ 2.23
SLC52A1Q9NWF4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
SLC52A1Q9NWF4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC28.99■■■□□ 2.23
SLC52A1Q9NWF4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
SLC52A1Q9NWF4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC28.99■■■□□ 2.23
SLC52A1Q9NWF4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC28.99■■■□□ 2.23
SLC52A1Q9NWF4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC28.99■■■□□ 2.23
SLC52A1Q9NWF4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
SLC52A1Q9NWF4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC28.99■■■□□ 2.23
SLC52A1Q9NWF4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC28.99■■■□□ 2.23
SLC52A1Q9NWF4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC28.99■■■□□ 2.23
SLC52A1Q9NWF4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC28.99■■■□□ 2.23
SLC52A1Q9NWF4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC28.99■■■□□ 2.23
SLC52A1Q9NWF4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC28.99■■■□□ 2.23
SLC52A1Q9NWF4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC28.98■■■□□ 2.23
SLC52A1Q9NWF4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
SLC52A1Q9NWF4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC28.98■■■□□ 2.23
SLC52A1Q9NWF4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
SLC52A1Q9NWF4 KRT8P20-201ENST00000423953 1409 ntBASIC28.98■■■□□ 2.23
SLC52A1Q9NWF4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
SLC52A1Q9NWF4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC28.98■■■□□ 2.23
SLC52A1Q9NWF4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC28.98■■■□□ 2.23
SLC52A1Q9NWF4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
SLC52A1Q9NWF4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC28.98■■■□□ 2.23
SLC52A1Q9NWF4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC28.98■■■□□ 2.23
SLC52A1Q9NWF4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC28.98■■■□□ 2.23
SLC52A1Q9NWF4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC28.98■■■□□ 2.23
SLC52A1Q9NWF4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
SLC52A1Q9NWF4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
SLC52A1Q9NWF4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC28.98■■■□□ 2.23
SLC52A1Q9NWF4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
SLC52A1Q9NWF4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC28.97■■■□□ 2.23
SLC52A1Q9NWF4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
SLC52A1Q9NWF4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC28.97■■■□□ 2.23
SLC52A1Q9NWF4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
SLC52A1Q9NWF4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC28.97■■■□□ 2.23
SLC52A1Q9NWF4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
SLC52A1Q9NWF4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC28.97■■■□□ 2.23
SLC52A1Q9NWF4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
SLC52A1Q9NWF4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC28.97■■■□□ 2.23
SLC52A1Q9NWF4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
SLC52A1Q9NWF4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC28.96■■■□□ 2.23
SLC52A1Q9NWF4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC28.96■■■□□ 2.23
SLC52A1Q9NWF4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
SLC52A1Q9NWF4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC28.96■■■□□ 2.23
SLC52A1Q9NWF4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC28.96■■■□□ 2.23
SLC52A1Q9NWF4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC28.96■■■□□ 2.23
SLC52A1Q9NWF4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
SLC52A1Q9NWF4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms