Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
PDLIM7Q9NR12 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PDLIM7Q9NR12 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PDLIM7Q9NR12 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PDLIM7Q9NR12 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PDLIM7Q9NR12 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.65■■□□□ 1.22
PDLIM7Q9NR12 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.65■■□□□ 1.22
PDLIM7Q9NR12 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PDLIM7Q9NR12 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
PDLIM7Q9NR12 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PDLIM7Q9NR12 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
PDLIM7Q9NR12 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PDLIM7Q9NR12 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PDLIM7Q9NR12 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
PDLIM7Q9NR12 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PDLIM7Q9NR12 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PDLIM7Q9NR12 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC22.64■■□□□ 1.21
PDLIM7Q9NR12 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC22.64■■□□□ 1.21
PDLIM7Q9NR12 AP003071.4-201ENST00000562276 1284 ntBASIC22.64■■□□□ 1.21
PDLIM7Q9NR12 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC22.64■■□□□ 1.21
PDLIM7Q9NR12 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PDLIM7Q9NR12 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.64■■□□□ 1.21
PDLIM7Q9NR12 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PDLIM7Q9NR12 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
PDLIM7Q9NR12 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PDLIM7Q9NR12 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PDLIM7Q9NR12 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
PDLIM7Q9NR12 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.21
PDLIM7Q9NR12 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
PDLIM7Q9NR12 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PDLIM7Q9NR12 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
PDLIM7Q9NR12 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.63■■□□□ 1.21
PDLIM7Q9NR12 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PDLIM7Q9NR12 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PDLIM7Q9NR12 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PDLIM7Q9NR12 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.63■■□□□ 1.21
PDLIM7Q9NR12 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC22.63■■□□□ 1.21
PDLIM7Q9NR12 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
PDLIM7Q9NR12 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC22.63■■□□□ 1.21
PDLIM7Q9NR12 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PDLIM7Q9NR12 AL049597.2-201ENST00000565575 961 ntBASIC22.63■■□□□ 1.21
PDLIM7Q9NR12 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC22.63■■□□□ 1.21
PDLIM7Q9NR12 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
PDLIM7Q9NR12 AL356652.1-201ENST00000615962 565 ntBASIC22.63■■□□□ 1.21
PDLIM7Q9NR12 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PDLIM7Q9NR12 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC22.63■■□□□ 1.21
PDLIM7Q9NR12 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.63■■□□□ 1.21
PDLIM7Q9NR12 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC22.63■■□□□ 1.21
PDLIM7Q9NR12 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.62■■□□□ 1.21
PDLIM7Q9NR12 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PDLIM7Q9NR12 MMP23A-201ENST00000234610 1017 ntBASIC22.62■■□□□ 1.21
PDLIM7Q9NR12 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PDLIM7Q9NR12 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC22.62■■□□□ 1.21
PDLIM7Q9NR12 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
PDLIM7Q9NR12 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC22.62■■□□□ 1.21
PDLIM7Q9NR12 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC22.62■■□□□ 1.21
PDLIM7Q9NR12 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC22.62■■□□□ 1.21
PDLIM7Q9NR12 GRAP-204ENST00000573099 846 ntTSL 3 BASIC22.62■■□□□ 1.21
PDLIM7Q9NR12 AL590326.2-201ENST00000625139 305 ntBASIC22.62■■□□□ 1.21
PDLIM7Q9NR12 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
PDLIM7Q9NR12 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PDLIM7Q9NR12 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.62■■□□□ 1.21
PDLIM7Q9NR12 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PDLIM7Q9NR12 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
PDLIM7Q9NR12 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PDLIM7Q9NR12 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PDLIM7Q9NR12 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PDLIM7Q9NR12 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PDLIM7Q9NR12 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC22.61■■□□□ 1.21
PDLIM7Q9NR12 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
PDLIM7Q9NR12 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PDLIM7Q9NR12 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PDLIM7Q9NR12 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC22.61■■□□□ 1.21
PDLIM7Q9NR12 AC092865.7-201ENST00000641832 219 ntBASIC22.61■■□□□ 1.21
PDLIM7Q9NR12 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PDLIM7Q9NR12 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.61■■□□□ 1.21
PDLIM7Q9NR12 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PDLIM7Q9NR12 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.61■■□□□ 1.21
PDLIM7Q9NR12 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PDLIM7Q9NR12 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC22.6■■□□□ 1.21
PDLIM7Q9NR12 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
PDLIM7Q9NR12 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDLIM7Q9NR12 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDLIM7Q9NR12 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
PDLIM7Q9NR12 KRT8P36-201ENST00000489121 1440 ntBASIC22.6■■□□□ 1.21
PDLIM7Q9NR12 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
PDLIM7Q9NR12 SAPCD2P4-201ENST00000424595 1171 ntBASIC22.6■■□□□ 1.21
PDLIM7Q9NR12 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
PDLIM7Q9NR12 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PDLIM7Q9NR12 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDLIM7Q9NR12 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.6■■□□□ 1.21
PDLIM7Q9NR12 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.6■■□□□ 1.21
PDLIM7Q9NR12 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PDLIM7Q9NR12 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC22.6■■□□□ 1.21
PDLIM7Q9NR12 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.59■■□□□ 1.21
PDLIM7Q9NR12 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
PDLIM7Q9NR12 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
PDLIM7Q9NR12 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDLIM7Q9NR12 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDLIM7Q9NR12 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms