Protein–RNA interactions for Protein: Q9NPR2

SEMA4B, Semaphorin-4B, humanhuman

Predicted RBP Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4BQ9NPR2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA4BQ9NPR2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA4BQ9NPR2 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEMA4BQ9NPR2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SEMA4BQ9NPR2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA4BQ9NPR2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA4BQ9NPR2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SEMA4BQ9NPR2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SEMA4BQ9NPR2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA4BQ9NPR2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.66■□□□□ 0.74
SEMA4BQ9NPR2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SEMA4BQ9NPR2 AL591742.1-201ENST00000604433 565 ntBASIC19.66■□□□□ 0.74
SEMA4BQ9NPR2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA4BQ9NPR2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA4BQ9NPR2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA4BQ9NPR2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SEMA4BQ9NPR2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.65■□□□□ 0.74
SEMA4BQ9NPR2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA4BQ9NPR2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA4BQ9NPR2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA4BQ9NPR2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA4BQ9NPR2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA4BQ9NPR2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA4BQ9NPR2 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.65■□□□□ 0.74
SEMA4BQ9NPR2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA4BQ9NPR2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA4BQ9NPR2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.65■□□□□ 0.74
SEMA4BQ9NPR2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
SEMA4BQ9NPR2 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA4BQ9NPR2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.65■□□□□ 0.74
SEMA4BQ9NPR2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.65■□□□□ 0.74
SEMA4BQ9NPR2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.65■□□□□ 0.74
SEMA4BQ9NPR2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.65■□□□□ 0.74
SEMA4BQ9NPR2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SEMA4BQ9NPR2 AC092437.1-201ENST00000624794 1048 ntBASIC19.65■□□□□ 0.74
SEMA4BQ9NPR2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA4BQ9NPR2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA4BQ9NPR2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA4BQ9NPR2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA4BQ9NPR2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA4BQ9NPR2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SEMA4BQ9NPR2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
SEMA4BQ9NPR2 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.64■□□□□ 0.74
SEMA4BQ9NPR2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
SEMA4BQ9NPR2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SEMA4BQ9NPR2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SEMA4BQ9NPR2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SEMA4BQ9NPR2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SEMA4BQ9NPR2 AC007952.6-201ENST00000573168 2673 ntBASIC19.64■□□□□ 0.73
SEMA4BQ9NPR2 AC003957.1-201ENST00000625108 2673 ntBASIC19.64■□□□□ 0.73
SEMA4BQ9NPR2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA4BQ9NPR2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA4BQ9NPR2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA4BQ9NPR2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
SEMA4BQ9NPR2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA4BQ9NPR2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA4BQ9NPR2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.64■□□□□ 0.73
SEMA4BQ9NPR2 AC137761.2-201ENST00000561729 223 ntBASIC19.64■□□□□ 0.73
SEMA4BQ9NPR2 AC145350.3-201ENST00000569033 163 ntBASIC19.64■□□□□ 0.73
SEMA4BQ9NPR2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
SEMA4BQ9NPR2 AL356652.1-201ENST00000615962 565 ntBASIC19.64■□□□□ 0.73
SEMA4BQ9NPR2 AC087633.2-202ENST00000565166 1439 ntBASIC19.64■□□□□ 0.73
SEMA4BQ9NPR2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SEMA4BQ9NPR2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.64■□□□□ 0.73
SEMA4BQ9NPR2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SEMA4BQ9NPR2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.64■□□□□ 0.73
SEMA4BQ9NPR2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA4BQ9NPR2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA4BQ9NPR2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SEMA4BQ9NPR2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA4BQ9NPR2 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
SEMA4BQ9NPR2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.63■□□□□ 0.73
SEMA4BQ9NPR2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA4BQ9NPR2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.63■□□□□ 0.73
SEMA4BQ9NPR2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.63■□□□□ 0.73
SEMA4BQ9NPR2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA4BQ9NPR2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA4BQ9NPR2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA4BQ9NPR2 PGM5P4-201ENST00000421970 445 ntBASIC19.63■□□□□ 0.73
SEMA4BQ9NPR2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.63■□□□□ 0.73
SEMA4BQ9NPR2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.63■□□□□ 0.73
SEMA4BQ9NPR2 AC016405.3-201ENST00000607710 860 ntBASIC19.63■□□□□ 0.73
SEMA4BQ9NPR2 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA4BQ9NPR2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA4BQ9NPR2 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SEMA4BQ9NPR2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEMA4BQ9NPR2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SEMA4BQ9NPR2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.63■□□□□ 0.73
SEMA4BQ9NPR2 AL691432.2-201ENST00000607222 2038 ntBASIC19.63■□□□□ 0.73
SEMA4BQ9NPR2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SEMA4BQ9NPR2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.62■□□□□ 0.73
SEMA4BQ9NPR2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SEMA4BQ9NPR2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SEMA4BQ9NPR2 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.62■□□□□ 0.73
SEMA4BQ9NPR2 CYP21A1P-202ENST00000354927 1481 ntBASIC19.62■□□□□ 0.73
SEMA4BQ9NPR2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SEMA4BQ9NPR2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SEMA4BQ9NPR2 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SEMA4BQ9NPR2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.62■□□□□ 0.73
SEMA4BQ9NPR2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms