Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.97■□□□□ 0.79
SSU72Q9NP77 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.97■□□□□ 0.79
SSU72Q9NP77 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SSU72Q9NP77 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSU72Q9NP77 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSU72Q9NP77 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.97■□□□□ 0.79
SSU72Q9NP77 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SSU72Q9NP77 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSU72Q9NP77 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SSU72Q9NP77 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSU72Q9NP77 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SSU72Q9NP77 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSU72Q9NP77 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSU72Q9NP77 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SSU72Q9NP77 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SSU72Q9NP77 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSU72Q9NP77 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSU72Q9NP77 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SSU72Q9NP77 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SSU72Q9NP77 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.96■□□□□ 0.79
SSU72Q9NP77 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSU72Q9NP77 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSU72Q9NP77 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.96■□□□□ 0.79
SSU72Q9NP77 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSU72Q9NP77 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSU72Q9NP77 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSU72Q9NP77 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.96■□□□□ 0.79
SSU72Q9NP77 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.95■□□□□ 0.78
SSU72Q9NP77 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSU72Q9NP77 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.95■□□□□ 0.78
SSU72Q9NP77 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.95■□□□□ 0.78
SSU72Q9NP77 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSU72Q9NP77 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SSU72Q9NP77 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SSU72Q9NP77 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSU72Q9NP77 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.95■□□□□ 0.78
SSU72Q9NP77 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSU72Q9NP77 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSU72Q9NP77 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.95■□□□□ 0.78
SSU72Q9NP77 DUX4L2-201ENST00000561772 1275 ntBASIC19.95■□□□□ 0.78
SSU72Q9NP77 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
SSU72Q9NP77 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSU72Q9NP77 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.95■□□□□ 0.78
SSU72Q9NP77 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.95■□□□□ 0.78
SSU72Q9NP77 DUX4L6-201ENST00000626483 1275 ntBASIC19.95■□□□□ 0.78
SSU72Q9NP77 DUX4L1-201ENST00000627662 1275 ntBASIC19.95■□□□□ 0.78
SSU72Q9NP77 DUX4L8-201ENST00000629013 1275 ntBASIC19.95■□□□□ 0.78
SSU72Q9NP77 DUX4L3-201ENST00000630187 1275 ntBASIC19.95■□□□□ 0.78
SSU72Q9NP77 DUX4L7-201ENST00000630678 1275 ntBASIC19.95■□□□□ 0.78
SSU72Q9NP77 DUX4L5-201ENST00000630834 1275 ntBASIC19.95■□□□□ 0.78
SSU72Q9NP77 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSU72Q9NP77 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSU72Q9NP77 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSU72Q9NP77 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.95■□□□□ 0.78
SSU72Q9NP77 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SSU72Q9NP77 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSU72Q9NP77 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.95■□□□□ 0.78
SSU72Q9NP77 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.94■□□□□ 0.78
SSU72Q9NP77 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSU72Q9NP77 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSU72Q9NP77 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSU72Q9NP77 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SSU72Q9NP77 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSU72Q9NP77 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSU72Q9NP77 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSU72Q9NP77 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.94■□□□□ 0.78
SSU72Q9NP77 MIR939-201ENST00000401314 82 ntBASIC19.94■□□□□ 0.78
SSU72Q9NP77 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.94■□□□□ 0.78
SSU72Q9NP77 SLC7A5P2-201ENST00000553010 536 ntBASIC19.94■□□□□ 0.78
SSU72Q9NP77 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SSU72Q9NP77 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.94■□□□□ 0.78
SSU72Q9NP77 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SSU72Q9NP77 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.94■□□□□ 0.78
SSU72Q9NP77 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
SSU72Q9NP77 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSU72Q9NP77 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSU72Q9NP77 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSU72Q9NP77 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.93■□□□□ 0.78
SSU72Q9NP77 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSU72Q9NP77 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSU72Q9NP77 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.93■□□□□ 0.78
SSU72Q9NP77 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.93■□□□□ 0.78
SSU72Q9NP77 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SSU72Q9NP77 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
SSU72Q9NP77 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
SSU72Q9NP77 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SSU72Q9NP77 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SSU72Q9NP77 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.93■□□□□ 0.78
SSU72Q9NP77 CCDC92B-201ENST00000575506 885 ntBASIC19.93■□□□□ 0.78
SSU72Q9NP77 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSU72Q9NP77 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SSU72Q9NP77 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SSU72Q9NP77 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.93■□□□□ 0.78
SSU72Q9NP77 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSU72Q9NP77 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSU72Q9NP77 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSU72Q9NP77 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSU72Q9NP77 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSU72Q9NP77 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.92■□□□□ 0.78
SSU72Q9NP77 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms