Protein–RNA interactions for Protein: Q9HBF4

ZFYVE1, Zinc finger FYVE domain-containing protein 1, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1Q9HBF4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZFYVE1Q9HBF4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
ZFYVE1Q9HBF4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZFYVE1Q9HBF4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZFYVE1Q9HBF4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ZFYVE1Q9HBF4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
ZFYVE1Q9HBF4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.15■□□□□ 0.82
ZFYVE1Q9HBF4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ZFYVE1Q9HBF4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
ZFYVE1Q9HBF4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ZFYVE1Q9HBF4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.14■□□□□ 0.82
ZFYVE1Q9HBF4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ZFYVE1Q9HBF4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZFYVE1Q9HBF4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZFYVE1Q9HBF4 PTBP1P-201ENST00000554374 1601 ntBASIC20.14■□□□□ 0.81
ZFYVE1Q9HBF4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ZFYVE1Q9HBF4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZFYVE1Q9HBF4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
ZFYVE1Q9HBF4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.14■□□□□ 0.81
ZFYVE1Q9HBF4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZFYVE1Q9HBF4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.14■□□□□ 0.81
ZFYVE1Q9HBF4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ZFYVE1Q9HBF4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.14■□□□□ 0.81
ZFYVE1Q9HBF4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ZFYVE1Q9HBF4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZFYVE1Q9HBF4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ZFYVE1Q9HBF4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.14■□□□□ 0.81
ZFYVE1Q9HBF4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ZFYVE1Q9HBF4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZFYVE1Q9HBF4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.13■□□□□ 0.81
ZFYVE1Q9HBF4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZFYVE1Q9HBF4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
ZFYVE1Q9HBF4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZFYVE1Q9HBF4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.13■□□□□ 0.81
ZFYVE1Q9HBF4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZFYVE1Q9HBF4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.13■□□□□ 0.81
ZFYVE1Q9HBF4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.13■□□□□ 0.81
ZFYVE1Q9HBF4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.13■□□□□ 0.81
ZFYVE1Q9HBF4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.13■□□□□ 0.81
ZFYVE1Q9HBF4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZFYVE1Q9HBF4 HLA-B-256ENST00000639848 1089 ntBASIC20.13■□□□□ 0.81
ZFYVE1Q9HBF4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
ZFYVE1Q9HBF4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZFYVE1Q9HBF4 AL512408.1-201ENST00000569378 2000 ntBASIC20.13■□□□□ 0.81
ZFYVE1Q9HBF4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.13■□□□□ 0.81
ZFYVE1Q9HBF4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.13■□□□□ 0.81
ZFYVE1Q9HBF4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZFYVE1Q9HBF4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZFYVE1Q9HBF4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.13■□□□□ 0.81
ZFYVE1Q9HBF4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.12■□□□□ 0.81
ZFYVE1Q9HBF4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.12■□□□□ 0.81
ZFYVE1Q9HBF4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZFYVE1Q9HBF4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZFYVE1Q9HBF4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
ZFYVE1Q9HBF4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZFYVE1Q9HBF4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.12■□□□□ 0.81
ZFYVE1Q9HBF4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZFYVE1Q9HBF4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.12■□□□□ 0.81
ZFYVE1Q9HBF4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.12■□□□□ 0.81
ZFYVE1Q9HBF4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
ZFYVE1Q9HBF4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.12■□□□□ 0.81
ZFYVE1Q9HBF4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.12■□□□□ 0.81
ZFYVE1Q9HBF4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZFYVE1Q9HBF4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZFYVE1Q9HBF4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.12■□□□□ 0.81
ZFYVE1Q9HBF4 AC023632.3-201ENST00000521633 145 ntBASIC20.12■□□□□ 0.81
ZFYVE1Q9HBF4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.12■□□□□ 0.81
ZFYVE1Q9HBF4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZFYVE1Q9HBF4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.12■□□□□ 0.81
ZFYVE1Q9HBF4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZFYVE1Q9HBF4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZFYVE1Q9HBF4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZFYVE1Q9HBF4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.12■□□□□ 0.81
ZFYVE1Q9HBF4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZFYVE1Q9HBF4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZFYVE1Q9HBF4 LINC01521-201ENST00000504184 1943 ntBASIC20.12■□□□□ 0.81
ZFYVE1Q9HBF4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZFYVE1Q9HBF4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
ZFYVE1Q9HBF4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZFYVE1Q9HBF4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
ZFYVE1Q9HBF4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZFYVE1Q9HBF4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZFYVE1Q9HBF4 KRT18P6-201ENST00000555540 1265 ntBASIC20.11■□□□□ 0.81
ZFYVE1Q9HBF4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.11■□□□□ 0.81
ZFYVE1Q9HBF4 AC060766.5-201ENST00000590539 871 ntBASIC20.11■□□□□ 0.81
ZFYVE1Q9HBF4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZFYVE1Q9HBF4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZFYVE1Q9HBF4 AC092368.3-202ENST00000574180 1591 ntBASIC20.11■□□□□ 0.81
ZFYVE1Q9HBF4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZFYVE1Q9HBF4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZFYVE1Q9HBF4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZFYVE1Q9HBF4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.1■□□□□ 0.81
ZFYVE1Q9HBF4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZFYVE1Q9HBF4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.1■□□□□ 0.81
ZFYVE1Q9HBF4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.1■□□□□ 0.81
ZFYVE1Q9HBF4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.1■□□□□ 0.81
ZFYVE1Q9HBF4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.1■□□□□ 0.81
ZFYVE1Q9HBF4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZFYVE1Q9HBF4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZFYVE1Q9HBF4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms