Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
THUMPD3Q9BV44 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
THUMPD3Q9BV44 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 AC116562.4-201ENST00000641316 2276 ntBASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 AC010141.2-201ENST00000452426 721 ntBASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
THUMPD3Q9BV44 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.16■□□□□ 0.66
THUMPD3Q9BV44 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
THUMPD3Q9BV44 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.16■□□□□ 0.66
THUMPD3Q9BV44 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.16■□□□□ 0.66
THUMPD3Q9BV44 AL158211.5-201ENST00000623583 2518 ntBASIC19.16■□□□□ 0.66
THUMPD3Q9BV44 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
THUMPD3Q9BV44 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.16■□□□□ 0.66
THUMPD3Q9BV44 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
THUMPD3Q9BV44 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
THUMPD3Q9BV44 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.16■□□□□ 0.66
THUMPD3Q9BV44 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.16■□□□□ 0.66
THUMPD3Q9BV44 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
THUMPD3Q9BV44 AC097381.1-201ENST00000429019 1296 ntBASIC19.16■□□□□ 0.66
THUMPD3Q9BV44 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
THUMPD3Q9BV44 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.16■□□□□ 0.66
THUMPD3Q9BV44 AC104187.1-201ENST00000607510 612 ntBASIC19.16■□□□□ 0.66
THUMPD3Q9BV44 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
THUMPD3Q9BV44 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
THUMPD3Q9BV44 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.16■□□□□ 0.66
THUMPD3Q9BV44 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
THUMPD3Q9BV44 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
THUMPD3Q9BV44 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
THUMPD3Q9BV44 AC125437.2-201ENST00000625180 2167 ntBASIC19.16■□□□□ 0.66
THUMPD3Q9BV44 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
THUMPD3Q9BV44 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
THUMPD3Q9BV44 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
THUMPD3Q9BV44 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
THUMPD3Q9BV44 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
THUMPD3Q9BV44 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
THUMPD3Q9BV44 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
THUMPD3Q9BV44 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
THUMPD3Q9BV44 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
THUMPD3Q9BV44 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
THUMPD3Q9BV44 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
THUMPD3Q9BV44 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
THUMPD3Q9BV44 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
THUMPD3Q9BV44 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.15■□□□□ 0.66
THUMPD3Q9BV44 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.15■□□□□ 0.66
THUMPD3Q9BV44 SLC7A5P2-201ENST00000553010 536 ntBASIC19.15■□□□□ 0.66
THUMPD3Q9BV44 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.15■□□□□ 0.66
THUMPD3Q9BV44 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.15■□□□□ 0.66
THUMPD3Q9BV44 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
THUMPD3Q9BV44 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
THUMPD3Q9BV44 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
THUMPD3Q9BV44 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
THUMPD3Q9BV44 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
THUMPD3Q9BV44 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
THUMPD3Q9BV44 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
THUMPD3Q9BV44 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
THUMPD3Q9BV44 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
THUMPD3Q9BV44 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
THUMPD3Q9BV44 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.14■□□□□ 0.65
THUMPD3Q9BV44 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
THUMPD3Q9BV44 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.14■□□□□ 0.65
THUMPD3Q9BV44 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.14■□□□□ 0.65
THUMPD3Q9BV44 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
THUMPD3Q9BV44 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
THUMPD3Q9BV44 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.14■□□□□ 0.65
THUMPD3Q9BV44 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.14■□□□□ 0.65
THUMPD3Q9BV44 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
THUMPD3Q9BV44 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
THUMPD3Q9BV44 DUX4L2-201ENST00000561772 1275 ntBASIC19.14■□□□□ 0.65
THUMPD3Q9BV44 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.14■□□□□ 0.65
THUMPD3Q9BV44 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
THUMPD3Q9BV44 MIR6821-201ENST00000617625 74 ntBASIC19.14■□□□□ 0.65
THUMPD3Q9BV44 DUX4L6-201ENST00000626483 1275 ntBASIC19.14■□□□□ 0.65
THUMPD3Q9BV44 DUX4L1-201ENST00000627662 1275 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms