Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PKP2Q99959 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PKP2Q99959 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PKP2Q99959 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PKP2Q99959 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PKP2Q99959 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PKP2Q99959 BX119927.1-201ENST00000636596 1552 ntBASIC18.9■□□□□ 0.62
PKP2Q99959 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PKP2Q99959 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.9■□□□□ 0.62
PKP2Q99959 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PKP2Q99959 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PKP2Q99959 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PKP2Q99959 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.9■□□□□ 0.62
PKP2Q99959 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
PKP2Q99959 AC136469.2-201ENST00000623944 1028 ntBASIC18.9■□□□□ 0.62
PKP2Q99959 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PKP2Q99959 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PKP2Q99959 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PKP2Q99959 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PKP2Q99959 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PKP2Q99959 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.9■□□□□ 0.62
PKP2Q99959 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.9■□□□□ 0.62
PKP2Q99959 AL138781.2-201ENST00000617896 1843 ntBASIC18.9■□□□□ 0.62
PKP2Q99959 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PKP2Q99959 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PKP2Q99959 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PKP2Q99959 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PKP2Q99959 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PKP2Q99959 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
PKP2Q99959 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.9■□□□□ 0.62
PKP2Q99959 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PKP2Q99959 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
PKP2Q99959 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PKP2Q99959 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.89■□□□□ 0.61
PKP2Q99959 AL049812.1-201ENST00000432563 2267 ntBASIC18.89■□□□□ 0.61
PKP2Q99959 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PKP2Q99959 AL138724.1-201ENST00000606771 1088 ntBASIC18.89■□□□□ 0.61
PKP2Q99959 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PKP2Q99959 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PKP2Q99959 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PKP2Q99959 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PKP2Q99959 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.89■□□□□ 0.61
PKP2Q99959 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PKP2Q99959 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PKP2Q99959 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.89■□□□□ 0.61
PKP2Q99959 DPP3P2-201ENST00000416030 1696 ntBASIC18.89■□□□□ 0.61
PKP2Q99959 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PKP2Q99959 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PKP2Q99959 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PKP2Q99959 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PKP2Q99959 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PKP2Q99959 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PKP2Q99959 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PKP2Q99959 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.88■□□□□ 0.61
PKP2Q99959 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.88■□□□□ 0.61
PKP2Q99959 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PKP2Q99959 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PKP2Q99959 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PKP2Q99959 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PKP2Q99959 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PKP2Q99959 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PKP2Q99959 AC005332.8-201ENST00000622750 2735 ntBASIC18.87■□□□□ 0.61
PKP2Q99959 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PKP2Q99959 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PKP2Q99959 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PKP2Q99959 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.87■□□□□ 0.61
PKP2Q99959 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PKP2Q99959 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PKP2Q99959 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PKP2Q99959 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.87■□□□□ 0.61
PKP2Q99959 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PKP2Q99959 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
PKP2Q99959 AC005224.4-201ENST00000583262 1652 ntBASIC18.87■□□□□ 0.61
PKP2Q99959 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.87■□□□□ 0.61
PKP2Q99959 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PKP2Q99959 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.87■□□□□ 0.61
PKP2Q99959 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.87■□□□□ 0.61
PKP2Q99959 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PKP2Q99959 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PKP2Q99959 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PKP2Q99959 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PKP2Q99959 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.86■□□□□ 0.61
PKP2Q99959 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PKP2Q99959 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PKP2Q99959 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PKP2Q99959 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PKP2Q99959 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.86■□□□□ 0.61
PKP2Q99959 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PKP2Q99959 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PKP2Q99959 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PKP2Q99959 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PKP2Q99959 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PKP2Q99959 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.86■□□□□ 0.61
PKP2Q99959 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PKP2Q99959 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PKP2Q99959 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.86■□□□□ 0.61
PKP2Q99959 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PKP2Q99959 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PKP2Q99959 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
PKP2Q99959 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms