Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PKP4Q99569 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PKP4Q99569 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.6■□□□□ 0.73
PKP4Q99569 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKP4Q99569 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PKP4Q99569 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PKP4Q99569 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PKP4Q99569 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PKP4Q99569 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PKP4Q99569 ID1-201ENST00000376105 1233 ntBASIC19.59■□□□□ 0.73
PKP4Q99569 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PKP4Q99569 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.59■□□□□ 0.73
PKP4Q99569 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PKP4Q99569 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PKP4Q99569 AC091874.3-201ENST00000512672 1195 ntBASIC19.59■□□□□ 0.73
PKP4Q99569 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.59■□□□□ 0.73
PKP4Q99569 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PKP4Q99569 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PKP4Q99569 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PKP4Q99569 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.59■□□□□ 0.73
PKP4Q99569 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.59■□□□□ 0.73
PKP4Q99569 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PKP4Q99569 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.59■□□□□ 0.73
PKP4Q99569 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.59■□□□□ 0.73
PKP4Q99569 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PKP4Q99569 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.58■□□□□ 0.73
PKP4Q99569 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.58■□□□□ 0.73
PKP4Q99569 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.58■□□□□ 0.73
PKP4Q99569 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.58■□□□□ 0.73
PKP4Q99569 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PKP4Q99569 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PKP4Q99569 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.58■□□□□ 0.72
PKP4Q99569 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
PKP4Q99569 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PKP4Q99569 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.58■□□□□ 0.72
PKP4Q99569 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.58■□□□□ 0.72
PKP4Q99569 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PKP4Q99569 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PKP4Q99569 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PKP4Q99569 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
PKP4Q99569 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PKP4Q99569 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.58■□□□□ 0.72
PKP4Q99569 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PKP4Q99569 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PKP4Q99569 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PKP4Q99569 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PKP4Q99569 PTBP1P-201ENST00000554374 1601 ntBASIC19.58■□□□□ 0.72
PKP4Q99569 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PKP4Q99569 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.58■□□□□ 0.72
PKP4Q99569 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.58■□□□□ 0.72
PKP4Q99569 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
PKP4Q99569 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PKP4Q99569 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PKP4Q99569 AL391422.3-201ENST00000603791 2761 ntBASIC19.57■□□□□ 0.72
PKP4Q99569 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PKP4Q99569 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PKP4Q99569 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PKP4Q99569 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.57■□□□□ 0.72
PKP4Q99569 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.57■□□□□ 0.72
PKP4Q99569 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.57■□□□□ 0.72
PKP4Q99569 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PKP4Q99569 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PKP4Q99569 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PKP4Q99569 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PKP4Q99569 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PKP4Q99569 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.57■□□□□ 0.72
PKP4Q99569 AC142086.2-201ENST00000569753 217 ntBASIC19.57■□□□□ 0.72
PKP4Q99569 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PKP4Q99569 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.57■□□□□ 0.72
PKP4Q99569 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PKP4Q99569 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.56■□□□□ 0.72
PKP4Q99569 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PKP4Q99569 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PKP4Q99569 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PKP4Q99569 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PKP4Q99569 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PKP4Q99569 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PKP4Q99569 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PKP4Q99569 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PKP4Q99569 AL355802.2-201ENST00000402069 882 ntBASIC19.56■□□□□ 0.72
PKP4Q99569 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PKP4Q99569 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PKP4Q99569 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.56■□□□□ 0.72
PKP4Q99569 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
PKP4Q99569 AC099778.1-201ENST00000568593 1911 ntBASIC19.56■□□□□ 0.72
PKP4Q99569 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PKP4Q99569 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PKP4Q99569 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PKP4Q99569 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.55■□□□□ 0.72
PKP4Q99569 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PKP4Q99569 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PKP4Q99569 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PKP4Q99569 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PKP4Q99569 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.55■□□□□ 0.72
PKP4Q99569 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PKP4Q99569 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.55■□□□□ 0.72
PKP4Q99569 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.55■□□□□ 0.72
PKP4Q99569 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
PKP4Q99569 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PKP4Q99569 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms