Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM5Q96HC4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM5Q96HC4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PDLIM5Q96HC4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM5Q96HC4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDLIM5Q96HC4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.69■□□□□ 0.74
PDLIM5Q96HC4 TMEM179-206ENST00000616017 1645 ntBASIC19.69■□□□□ 0.74
PDLIM5Q96HC4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.68■□□□□ 0.74
PDLIM5Q96HC4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDLIM5Q96HC4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDLIM5Q96HC4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDLIM5Q96HC4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDLIM5Q96HC4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PDLIM5Q96HC4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.68■□□□□ 0.74
PDLIM5Q96HC4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PDLIM5Q96HC4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDLIM5Q96HC4 C2orf69P4-201ENST00000565394 541 ntBASIC19.68■□□□□ 0.74
PDLIM5Q96HC4 AL031963.3-201ENST00000606441 850 ntBASIC19.68■□□□□ 0.74
PDLIM5Q96HC4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PDLIM5Q96HC4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.68■□□□□ 0.74
PDLIM5Q96HC4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PDLIM5Q96HC4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDLIM5Q96HC4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDLIM5Q96HC4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM5Q96HC4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM5Q96HC4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM5Q96HC4 KRT17P1-201ENST00000399211 1546 ntBASIC19.67■□□□□ 0.74
PDLIM5Q96HC4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM5Q96HC4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM5Q96HC4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.67■□□□□ 0.74
PDLIM5Q96HC4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM5Q96HC4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.67■□□□□ 0.74
PDLIM5Q96HC4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM5Q96HC4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM5Q96HC4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.67■□□□□ 0.74
PDLIM5Q96HC4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM5Q96HC4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
PDLIM5Q96HC4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM5Q96HC4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.67■□□□□ 0.74
PDLIM5Q96HC4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.67■□□□□ 0.74
PDLIM5Q96HC4 AL050303.2-201ENST00000619798 666 ntBASIC19.67■□□□□ 0.74
PDLIM5Q96HC4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM5Q96HC4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.67■□□□□ 0.74
PDLIM5Q96HC4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.67■□□□□ 0.74
PDLIM5Q96HC4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDLIM5Q96HC4 KRT8P20-201ENST00000423953 1409 ntBASIC19.67■□□□□ 0.74
PDLIM5Q96HC4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.66■□□□□ 0.74
PDLIM5Q96HC4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDLIM5Q96HC4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDLIM5Q96HC4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDLIM5Q96HC4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.66■□□□□ 0.74
PDLIM5Q96HC4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.66■□□□□ 0.74
PDLIM5Q96HC4 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.66■□□□□ 0.74
PDLIM5Q96HC4 AC023632.3-201ENST00000521633 145 ntBASIC19.66■□□□□ 0.74
PDLIM5Q96HC4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.66■□□□□ 0.74
PDLIM5Q96HC4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.66■□□□□ 0.74
PDLIM5Q96HC4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDLIM5Q96HC4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDLIM5Q96HC4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
PDLIM5Q96HC4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDLIM5Q96HC4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PDLIM5Q96HC4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDLIM5Q96HC4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDLIM5Q96HC4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDLIM5Q96HC4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PDLIM5Q96HC4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDLIM5Q96HC4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDLIM5Q96HC4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDLIM5Q96HC4 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.65■□□□□ 0.74
PDLIM5Q96HC4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.65■□□□□ 0.74
PDLIM5Q96HC4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
PDLIM5Q96HC4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDLIM5Q96HC4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.65■□□□□ 0.74
PDLIM5Q96HC4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDLIM5Q96HC4 AF201337.1-201ENST00000520239 748 ntBASIC19.65■□□□□ 0.74
PDLIM5Q96HC4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.65■□□□□ 0.74
PDLIM5Q96HC4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.65■□□□□ 0.74
PDLIM5Q96HC4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDLIM5Q96HC4 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.65■□□□□ 0.74
PDLIM5Q96HC4 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.65■□□□□ 0.74
PDLIM5Q96HC4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDLIM5Q96HC4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDLIM5Q96HC4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDLIM5Q96HC4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDLIM5Q96HC4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDLIM5Q96HC4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDLIM5Q96HC4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDLIM5Q96HC4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.64■□□□□ 0.74
PDLIM5Q96HC4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.64■□□□□ 0.74
PDLIM5Q96HC4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PDLIM5Q96HC4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
PDLIM5Q96HC4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PDLIM5Q96HC4 AFG3L1P-217ENST00000557444 2447 ntBASIC19.64■□□□□ 0.74
PDLIM5Q96HC4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PDLIM5Q96HC4 PCDHAC2-203ENST00000615316 3011 ntBASIC19.64■□□□□ 0.73
PDLIM5Q96HC4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDLIM5Q96HC4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDLIM5Q96HC4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.64■□□□□ 0.73
PDLIM5Q96HC4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDLIM5Q96HC4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms