Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ARHGEF39Q8N4T4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
ARHGEF39Q8N4T4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.03■□□□□ 0.64
ARHGEF39Q8N4T4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ARHGEF39Q8N4T4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.03■□□□□ 0.64
ARHGEF39Q8N4T4 AC120498.8-201ENST00000614275 531 ntBASIC19.03■□□□□ 0.64
ARHGEF39Q8N4T4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.03■□□□□ 0.64
ARHGEF39Q8N4T4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.03■□□□□ 0.64
ARHGEF39Q8N4T4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ARHGEF39Q8N4T4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ARHGEF39Q8N4T4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ARHGEF39Q8N4T4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ARHGEF39Q8N4T4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ARHGEF39Q8N4T4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
ARHGEF39Q8N4T4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ARHGEF39Q8N4T4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ARHGEF39Q8N4T4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.02■□□□□ 0.64
ARHGEF39Q8N4T4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.02■□□□□ 0.64
ARHGEF39Q8N4T4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.02■□□□□ 0.64
ARHGEF39Q8N4T4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.02■□□□□ 0.64
ARHGEF39Q8N4T4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.02■□□□□ 0.64
ARHGEF39Q8N4T4 AC128676.1-201ENST00000454392 318 ntBASIC19.02■□□□□ 0.64
ARHGEF39Q8N4T4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.02■□□□□ 0.64
ARHGEF39Q8N4T4 AC233263.1-201ENST00000578059 224 ntBASIC19.02■□□□□ 0.64
ARHGEF39Q8N4T4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.02■□□□□ 0.64
ARHGEF39Q8N4T4 AC006058.3-201ENST00000606217 1069 ntBASIC19.02■□□□□ 0.64
ARHGEF39Q8N4T4 AC073648.6-201ENST00000641589 218 ntBASIC19.02■□□□□ 0.64
ARHGEF39Q8N4T4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ARHGEF39Q8N4T4 PKD1P6-201ENST00000343738 4769 ntBASIC19.02■□□□□ 0.64
ARHGEF39Q8N4T4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ARHGEF39Q8N4T4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ARHGEF39Q8N4T4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ARHGEF39Q8N4T4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ARHGEF39Q8N4T4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ARHGEF39Q8N4T4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ARHGEF39Q8N4T4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ARHGEF39Q8N4T4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.02■□□□□ 0.63
ARHGEF39Q8N4T4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF39Q8N4T4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.01■□□□□ 0.63
ARHGEF39Q8N4T4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
ARHGEF39Q8N4T4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF39Q8N4T4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.01■□□□□ 0.63
ARHGEF39Q8N4T4 AL162377.1-201ENST00000618844 1793 ntBASIC19.01■□□□□ 0.63
ARHGEF39Q8N4T4 KRT8P17-201ENST00000453110 1448 ntBASIC19.01■□□□□ 0.63
ARHGEF39Q8N4T4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF39Q8N4T4 AL390719.1-204ENST00000412397 1219 ntBASIC19.01■□□□□ 0.63
ARHGEF39Q8N4T4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF39Q8N4T4 POM121L13P-201ENST00000422362 380 ntBASIC19.01■□□□□ 0.63
ARHGEF39Q8N4T4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.01■□□□□ 0.63
ARHGEF39Q8N4T4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.01■□□□□ 0.63
ARHGEF39Q8N4T4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF39Q8N4T4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF39Q8N4T4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF39Q8N4T4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
ARHGEF39Q8N4T4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.01■□□□□ 0.63
ARHGEF39Q8N4T4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF39Q8N4T4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.01■□□□□ 0.63
ARHGEF39Q8N4T4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF39Q8N4T4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ARHGEF39Q8N4T4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF39Q8N4T4 KRT8P20-201ENST00000423953 1409 ntBASIC19■□□□□ 0.63
ARHGEF39Q8N4T4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19■□□□□ 0.63
ARHGEF39Q8N4T4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF39Q8N4T4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
ARHGEF39Q8N4T4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF39Q8N4T4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF39Q8N4T4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF39Q8N4T4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF39Q8N4T4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF39Q8N4T4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF39Q8N4T4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19■□□□□ 0.63
ARHGEF39Q8N4T4 TMEM191A-211ENST00000637163 1067 ntBASIC19■□□□□ 0.63
ARHGEF39Q8N4T4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19■□□□□ 0.63
ARHGEF39Q8N4T4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
ARHGEF39Q8N4T4 GABARAPL3-202ENST00000624044 1851 ntBASIC19■□□□□ 0.63
ARHGEF39Q8N4T4 SMG8-203ENST00000578922 2178 ntBASIC19■□□□□ 0.63
ARHGEF39Q8N4T4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF39Q8N4T4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF39Q8N4T4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19■□□□□ 0.63
ARHGEF39Q8N4T4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ARHGEF39Q8N4T4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ARHGEF39Q8N4T4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ARHGEF39Q8N4T4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ARHGEF39Q8N4T4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ARHGEF39Q8N4T4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.99■□□□□ 0.63
ARHGEF39Q8N4T4 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.99■□□□□ 0.63
ARHGEF39Q8N4T4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.99■□□□□ 0.63
ARHGEF39Q8N4T4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
ARHGEF39Q8N4T4 AC069544.1-201ENST00000609399 999 ntBASIC18.99■□□□□ 0.63
ARHGEF39Q8N4T4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.99■□□□□ 0.63
ARHGEF39Q8N4T4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ARHGEF39Q8N4T4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ARHGEF39Q8N4T4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
ARHGEF39Q8N4T4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ARHGEF39Q8N4T4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ARHGEF39Q8N4T4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ARHGEF39Q8N4T4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
ARHGEF39Q8N4T4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ARHGEF39Q8N4T4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ARHGEF39Q8N4T4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms