Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
VPS8Q8N3P4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
VPS8Q8N3P4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC31.58■■■□□ 2.65
VPS8Q8N3P4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
VPS8Q8N3P4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
VPS8Q8N3P4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
VPS8Q8N3P4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
VPS8Q8N3P4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC31.58■■■□□ 2.65
VPS8Q8N3P4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
VPS8Q8N3P4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC31.58■■■□□ 2.65
VPS8Q8N3P4 SMG8-203ENST00000578922 2178 ntBASIC31.58■■■□□ 2.65
VPS8Q8N3P4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC31.57■■■□□ 2.65
VPS8Q8N3P4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC31.57■■■□□ 2.64
VPS8Q8N3P4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
VPS8Q8N3P4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
VPS8Q8N3P4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
VPS8Q8N3P4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC31.57■■■□□ 2.64
VPS8Q8N3P4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
VPS8Q8N3P4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
VPS8Q8N3P4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC31.57■■■□□ 2.64
VPS8Q8N3P4 HLA-G-202ENST00000376815 851 ntBASIC31.57■■■□□ 2.64
VPS8Q8N3P4 HLA-G-203ENST00000376818 1127 ntBASIC31.57■■■□□ 2.64
VPS8Q8N3P4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC31.57■■■□□ 2.64
VPS8Q8N3P4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC31.57■■■□□ 2.64
VPS8Q8N3P4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
VPS8Q8N3P4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC31.57■■■□□ 2.64
VPS8Q8N3P4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC31.57■■■□□ 2.64
VPS8Q8N3P4 AL121906.2-201ENST00000621597 723 ntBASIC31.57■■■□□ 2.64
VPS8Q8N3P4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
VPS8Q8N3P4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
VPS8Q8N3P4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC31.56■■■□□ 2.64
VPS8Q8N3P4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
VPS8Q8N3P4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC31.56■■■□□ 2.64
VPS8Q8N3P4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
VPS8Q8N3P4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
VPS8Q8N3P4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
VPS8Q8N3P4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC31.56■■■□□ 2.64
VPS8Q8N3P4 RPPH1-201ENST00000516869 333 ntBASIC31.56■■■□□ 2.64
VPS8Q8N3P4 MAX-217ENST00000557277 728 ntTSL 3 BASIC31.56■■■□□ 2.64
VPS8Q8N3P4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC31.56■■■□□ 2.64
VPS8Q8N3P4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC31.56■■■□□ 2.64
VPS8Q8N3P4 AC124016.1-201ENST00000609552 612 ntBASIC31.56■■■□□ 2.64
VPS8Q8N3P4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
VPS8Q8N3P4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC31.56■■■□□ 2.64
VPS8Q8N3P4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC31.56■■■□□ 2.64
VPS8Q8N3P4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC31.55■■■□□ 2.64
VPS8Q8N3P4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
VPS8Q8N3P4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
VPS8Q8N3P4 BX119927.1-201ENST00000636596 1552 ntBASIC31.55■■■□□ 2.64
VPS8Q8N3P4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC31.55■■■□□ 2.64
VPS8Q8N3P4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC31.55■■■□□ 2.64
VPS8Q8N3P4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC31.55■■■□□ 2.64
VPS8Q8N3P4 AC133681.1-201ENST00000465482 601 ntBASIC31.55■■■□□ 2.64
VPS8Q8N3P4 C1QBPP2-201ENST00000528754 825 ntBASIC31.55■■■□□ 2.64
VPS8Q8N3P4 AL121829.2-201ENST00000620908 328 ntBASIC31.55■■■□□ 2.64
VPS8Q8N3P4 AC066615.1-201ENST00000640911 628 ntBASIC31.55■■■□□ 2.64
VPS8Q8N3P4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
VPS8Q8N3P4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC31.55■■■□□ 2.64
VPS8Q8N3P4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
VPS8Q8N3P4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
VPS8Q8N3P4 FEM1AP1-201ENST00000431297 1995 ntBASIC31.54■■■□□ 2.64
VPS8Q8N3P4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
VPS8Q8N3P4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC31.54■■■□□ 2.64
VPS8Q8N3P4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
VPS8Q8N3P4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
VPS8Q8N3P4 GABARAPL3-202ENST00000624044 1851 ntBASIC31.54■■■□□ 2.64
VPS8Q8N3P4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
VPS8Q8N3P4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
VPS8Q8N3P4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC31.54■■■□□ 2.64
VPS8Q8N3P4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC31.54■■■□□ 2.64
VPS8Q8N3P4 AC142381.4-202ENST00000563973 229 ntBASIC31.54■■■□□ 2.64
VPS8Q8N3P4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC31.54■■■□□ 2.64
VPS8Q8N3P4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
VPS8Q8N3P4 Six3os1_6.1-201ENST00000620790 196 ntBASIC31.54■■■□□ 2.64
VPS8Q8N3P4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
VPS8Q8N3P4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
VPS8Q8N3P4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
VPS8Q8N3P4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
VPS8Q8N3P4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
VPS8Q8N3P4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
VPS8Q8N3P4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC31.53■■■□□ 2.64
VPS8Q8N3P4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
VPS8Q8N3P4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
VPS8Q8N3P4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
VPS8Q8N3P4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC31.53■■■□□ 2.64
VPS8Q8N3P4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC31.53■■■□□ 2.64
VPS8Q8N3P4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC31.53■■■□□ 2.64
VPS8Q8N3P4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC31.53■■■□□ 2.64
VPS8Q8N3P4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
VPS8Q8N3P4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
VPS8Q8N3P4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC31.53■■■□□ 2.64
VPS8Q8N3P4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC31.53■■■□□ 2.64
VPS8Q8N3P4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
VPS8Q8N3P4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
VPS8Q8N3P4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
VPS8Q8N3P4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
VPS8Q8N3P4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
VPS8Q8N3P4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC31.52■■■□□ 2.64
VPS8Q8N3P4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
VPS8Q8N3P4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms