Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC50Q8IVM0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CCDC50Q8IVM0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC50Q8IVM0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC50Q8IVM0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
CCDC50Q8IVM0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC50Q8IVM0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC50Q8IVM0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.17■□□□□ 0.98
CCDC50Q8IVM0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CCDC50Q8IVM0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC50Q8IVM0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.17■□□□□ 0.98
CCDC50Q8IVM0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC50Q8IVM0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.17■□□□□ 0.98
CCDC50Q8IVM0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CCDC50Q8IVM0 MYCNOS-205ENST00000641950 531 ntBASIC21.17■□□□□ 0.98
CCDC50Q8IVM0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC50Q8IVM0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC50Q8IVM0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC50Q8IVM0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC50Q8IVM0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC50Q8IVM0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
CCDC50Q8IVM0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC50Q8IVM0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC50Q8IVM0 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC50Q8IVM0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC50Q8IVM0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC50Q8IVM0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC50Q8IVM0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC50Q8IVM0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC50Q8IVM0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC50Q8IVM0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.16■□□□□ 0.98
CCDC50Q8IVM0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC50Q8IVM0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
CCDC50Q8IVM0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC50Q8IVM0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC50Q8IVM0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC50Q8IVM0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC50Q8IVM0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC50Q8IVM0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC50Q8IVM0 DPP3P2-201ENST00000416030 1696 ntBASIC21.15■□□□□ 0.98
CCDC50Q8IVM0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC50Q8IVM0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CCDC50Q8IVM0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC50Q8IVM0 KRT8P36-201ENST00000489121 1440 ntBASIC21.15■□□□□ 0.98
CCDC50Q8IVM0 AC087289.5-201ENST00000586076 3175 ntBASIC21.15■□□□□ 0.98
CCDC50Q8IVM0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.15■□□□□ 0.98
CCDC50Q8IVM0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CCDC50Q8IVM0 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC50Q8IVM0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.15■□□□□ 0.98
CCDC50Q8IVM0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.15■□□□□ 0.98
CCDC50Q8IVM0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.15■□□□□ 0.98
CCDC50Q8IVM0 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC50Q8IVM0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC50Q8IVM0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC50Q8IVM0 TCF3P1-201ENST00000423021 1937 ntBASIC21.15■□□□□ 0.98
CCDC50Q8IVM0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CCDC50Q8IVM0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC50Q8IVM0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC50Q8IVM0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC50Q8IVM0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.15■□□□□ 0.98
CCDC50Q8IVM0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.14■□□□□ 0.98
CCDC50Q8IVM0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC50Q8IVM0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC50Q8IVM0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC50Q8IVM0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC50Q8IVM0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CCDC50Q8IVM0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC50Q8IVM0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC50Q8IVM0 NTF6G-201ENST00000591094 616 ntBASIC21.14■□□□□ 0.97
CCDC50Q8IVM0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
CCDC50Q8IVM0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC50Q8IVM0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC50Q8IVM0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
CCDC50Q8IVM0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC50Q8IVM0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC50Q8IVM0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC50Q8IVM0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CCDC50Q8IVM0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CCDC50Q8IVM0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CCDC50Q8IVM0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC50Q8IVM0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC50Q8IVM0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC50Q8IVM0 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.13■□□□□ 0.97
CCDC50Q8IVM0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC50Q8IVM0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.13■□□□□ 0.97
CCDC50Q8IVM0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC50Q8IVM0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.13■□□□□ 0.97
CCDC50Q8IVM0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC50Q8IVM0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CCDC50Q8IVM0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC50Q8IVM0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC50Q8IVM0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
CCDC50Q8IVM0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC50Q8IVM0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC50Q8IVM0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC50Q8IVM0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC50Q8IVM0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC50Q8IVM0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC50Q8IVM0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC50Q8IVM0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms