Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF546Q86UE3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF546Q86UE3 TMEM179-206ENST00000616017 1645 ntBASIC16.71■□□□□ 0.27
ZNF546Q86UE3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF546Q86UE3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF546Q86UE3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF546Q86UE3 AL138781.2-201ENST00000617896 1843 ntBASIC16.71■□□□□ 0.27
ZNF546Q86UE3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF546Q86UE3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC16.71■□□□□ 0.27
ZNF546Q86UE3 AL451085.2-201ENST00000605085 799 ntBASIC16.71■□□□□ 0.27
ZNF546Q86UE3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
ZNF546Q86UE3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF546Q86UE3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF546Q86UE3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF546Q86UE3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF546Q86UE3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF546Q86UE3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF546Q86UE3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF546Q86UE3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF546Q86UE3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF546Q86UE3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
ZNF546Q86UE3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF546Q86UE3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.7■□□□□ 0.26
ZNF546Q86UE3 AP006587.3-201ENST00000525742 1516 ntBASIC16.7■□□□□ 0.26
ZNF546Q86UE3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF546Q86UE3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF546Q86UE3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
ZNF546Q86UE3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF546Q86UE3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF546Q86UE3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF546Q86UE3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF546Q86UE3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF546Q86UE3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF546Q86UE3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF546Q86UE3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF546Q86UE3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF546Q86UE3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF546Q86UE3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.7■□□□□ 0.26
ZNF546Q86UE3 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.7■□□□□ 0.26
ZNF546Q86UE3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF546Q86UE3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF546Q86UE3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC16.7■□□□□ 0.26
ZNF546Q86UE3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.7■□□□□ 0.26
ZNF546Q86UE3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF546Q86UE3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF546Q86UE3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ZNF546Q86UE3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF546Q86UE3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.7■□□□□ 0.26
ZNF546Q86UE3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF546Q86UE3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF546Q86UE3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
ZNF546Q86UE3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
ZNF546Q86UE3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ZNF546Q86UE3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF546Q86UE3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF546Q86UE3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF546Q86UE3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
ZNF546Q86UE3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF546Q86UE3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
ZNF546Q86UE3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF546Q86UE3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ZNF546Q86UE3 TSPY9P-201ENST00000440215 945 ntBASIC16.69■□□□□ 0.26
ZNF546Q86UE3 TSPY11P-201ENST00000442607 1045 ntBASIC16.69■□□□□ 0.26
ZNF546Q86UE3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.69■□□□□ 0.26
ZNF546Q86UE3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC16.69■□□□□ 0.26
ZNF546Q86UE3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.69■□□□□ 0.26
ZNF546Q86UE3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ZNF546Q86UE3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF546Q86UE3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF546Q86UE3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF546Q86UE3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.69■□□□□ 0.26
ZNF546Q86UE3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC16.69■□□□□ 0.26
ZNF546Q86UE3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.69■□□□□ 0.26
ZNF546Q86UE3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF546Q86UE3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ZNF546Q86UE3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF546Q86UE3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
ZNF546Q86UE3 FZD10-202ENST00000539839 3282 ntBASIC16.69■□□□□ 0.26
ZNF546Q86UE3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF546Q86UE3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF546Q86UE3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF546Q86UE3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF546Q86UE3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF546Q86UE3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF546Q86UE3 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.68■□□□□ 0.26
ZNF546Q86UE3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF546Q86UE3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF546Q86UE3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF546Q86UE3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF546Q86UE3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ZNF546Q86UE3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF546Q86UE3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF546Q86UE3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF546Q86UE3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF546Q86UE3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF546Q86UE3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF546Q86UE3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.67■□□□□ 0.26
ZNF546Q86UE3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF546Q86UE3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ZNF546Q86UE3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms