Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF44Q7L0R7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF44Q7L0R7 AC092720.2-201ENST00000602388 1665 ntBASIC19.28■□□□□ 0.68
RNF44Q7L0R7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.28■□□□□ 0.68
RNF44Q7L0R7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
RNF44Q7L0R7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
RNF44Q7L0R7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF44Q7L0R7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF44Q7L0R7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF44Q7L0R7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF44Q7L0R7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF44Q7L0R7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF44Q7L0R7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF44Q7L0R7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF44Q7L0R7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
RNF44Q7L0R7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF44Q7L0R7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RNF44Q7L0R7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
RNF44Q7L0R7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
RNF44Q7L0R7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF44Q7L0R7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.27■□□□□ 0.68
RNF44Q7L0R7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF44Q7L0R7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF44Q7L0R7 PTBP1P-201ENST00000554374 1601 ntBASIC19.27■□□□□ 0.68
RNF44Q7L0R7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF44Q7L0R7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF44Q7L0R7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RNF44Q7L0R7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.27■□□□□ 0.68
RNF44Q7L0R7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.27■□□□□ 0.68
RNF44Q7L0R7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.27■□□□□ 0.68
RNF44Q7L0R7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
RNF44Q7L0R7 AC023632.3-201ENST00000521633 145 ntBASIC19.27■□□□□ 0.68
RNF44Q7L0R7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.27■□□□□ 0.68
RNF44Q7L0R7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF44Q7L0R7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.27■□□□□ 0.68
RNF44Q7L0R7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
RNF44Q7L0R7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF44Q7L0R7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF44Q7L0R7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RNF44Q7L0R7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF44Q7L0R7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF44Q7L0R7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.27■□□□□ 0.67
RNF44Q7L0R7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF44Q7L0R7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.27■□□□□ 0.67
RNF44Q7L0R7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF44Q7L0R7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF44Q7L0R7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF44Q7L0R7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF44Q7L0R7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF44Q7L0R7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF44Q7L0R7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF44Q7L0R7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF44Q7L0R7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF44Q7L0R7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF44Q7L0R7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF44Q7L0R7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF44Q7L0R7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF44Q7L0R7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF44Q7L0R7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF44Q7L0R7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF44Q7L0R7 AC005829.2-201ENST00000571422 1056 ntBASIC19.26■□□□□ 0.67
RNF44Q7L0R7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF44Q7L0R7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.26■□□□□ 0.67
RNF44Q7L0R7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF44Q7L0R7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF44Q7L0R7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF44Q7L0R7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
RNF44Q7L0R7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RNF44Q7L0R7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
RNF44Q7L0R7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF44Q7L0R7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF44Q7L0R7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF44Q7L0R7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF44Q7L0R7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RNF44Q7L0R7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF44Q7L0R7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF44Q7L0R7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF44Q7L0R7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF44Q7L0R7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF44Q7L0R7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF44Q7L0R7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF44Q7L0R7 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.25■□□□□ 0.67
RNF44Q7L0R7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RNF44Q7L0R7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF44Q7L0R7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF44Q7L0R7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF44Q7L0R7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
RNF44Q7L0R7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.25■□□□□ 0.67
RNF44Q7L0R7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF44Q7L0R7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF44Q7L0R7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF44Q7L0R7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF44Q7L0R7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF44Q7L0R7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF44Q7L0R7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF44Q7L0R7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF44Q7L0R7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF44Q7L0R7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF44Q7L0R7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RNF44Q7L0R7 ABHD17AP1-201ENST00000358206 933 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms