Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRFN4Q6PJG9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LRFN4Q6PJG9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.07■□□□□ 0.48
LRFN4Q6PJG9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.06■□□□□ 0.48
LRFN4Q6PJG9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN4Q6PJG9 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN4Q6PJG9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN4Q6PJG9 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
LRFN4Q6PJG9 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN4Q6PJG9 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN4Q6PJG9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.06■□□□□ 0.48
LRFN4Q6PJG9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LRFN4Q6PJG9 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN4Q6PJG9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
LRFN4Q6PJG9 RARRES2P4-201ENST00000514074 484 ntBASIC18.06■□□□□ 0.48
LRFN4Q6PJG9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.06■□□□□ 0.48
LRFN4Q6PJG9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN4Q6PJG9 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
LRFN4Q6PJG9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.06■□□□□ 0.48
LRFN4Q6PJG9 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LRFN4Q6PJG9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN4Q6PJG9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN4Q6PJG9 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRFN4Q6PJG9 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LRFN4Q6PJG9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN4Q6PJG9 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.05■□□□□ 0.48
LRFN4Q6PJG9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
LRFN4Q6PJG9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.05■□□□□ 0.48
LRFN4Q6PJG9 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.05■□□□□ 0.48
LRFN4Q6PJG9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN4Q6PJG9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.05■□□□□ 0.48
LRFN4Q6PJG9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN4Q6PJG9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN4Q6PJG9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
LRFN4Q6PJG9 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN4Q6PJG9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN4Q6PJG9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN4Q6PJG9 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN4Q6PJG9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN4Q6PJG9 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
LRFN4Q6PJG9 CDCA4P2-201ENST00000441182 718 ntBASIC18.05■□□□□ 0.48
LRFN4Q6PJG9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.05■□□□□ 0.48
LRFN4Q6PJG9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
LRFN4Q6PJG9 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.05■□□□□ 0.48
LRFN4Q6PJG9 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
LRFN4Q6PJG9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.05■□□□□ 0.48
LRFN4Q6PJG9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN4Q6PJG9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN4Q6PJG9 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.05■□□□□ 0.48
LRFN4Q6PJG9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRFN4Q6PJG9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.05■□□□□ 0.48
LRFN4Q6PJG9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
LRFN4Q6PJG9 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN4Q6PJG9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.04■□□□□ 0.48
LRFN4Q6PJG9 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
LRFN4Q6PJG9 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
LRFN4Q6PJG9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN4Q6PJG9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN4Q6PJG9 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LRFN4Q6PJG9 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.04■□□□□ 0.48
LRFN4Q6PJG9 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.04■□□□□ 0.48
LRFN4Q6PJG9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.04■□□□□ 0.48
LRFN4Q6PJG9 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.04■□□□□ 0.48
LRFN4Q6PJG9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.04■□□□□ 0.48
LRFN4Q6PJG9 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.04■□□□□ 0.48
LRFN4Q6PJG9 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
LRFN4Q6PJG9 AC073111.5-205ENST00000641717 521 ntBASIC18.04■□□□□ 0.48
LRFN4Q6PJG9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN4Q6PJG9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
LRFN4Q6PJG9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN4Q6PJG9 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN4Q6PJG9 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN4Q6PJG9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN4Q6PJG9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.04■□□□□ 0.48
LRFN4Q6PJG9 AL020996.1-203ENST00000536896 2307 ntBASIC18.04■□□□□ 0.48
LRFN4Q6PJG9 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.04■□□□□ 0.48
LRFN4Q6PJG9 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN4Q6PJG9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRFN4Q6PJG9 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
LRFN4Q6PJG9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
LRFN4Q6PJG9 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
LRFN4Q6PJG9 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRFN4Q6PJG9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRFN4Q6PJG9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.03■□□□□ 0.48
LRFN4Q6PJG9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRFN4Q6PJG9 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRFN4Q6PJG9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LRFN4Q6PJG9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.03■□□□□ 0.48
LRFN4Q6PJG9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
LRFN4Q6PJG9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.03■□□□□ 0.48
LRFN4Q6PJG9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
LRFN4Q6PJG9 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.03■□□□□ 0.48
LRFN4Q6PJG9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.03■□□□□ 0.48
LRFN4Q6PJG9 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.03■□□□□ 0.48
LRFN4Q6PJG9 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.03■□□□□ 0.48
LRFN4Q6PJG9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.03■□□□□ 0.48
LRFN4Q6PJG9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.03■□□□□ 0.48
LRFN4Q6PJG9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.03■□□□□ 0.48
LRFN4Q6PJG9 KRT8P36-201ENST00000489121 1440 ntBASIC18.03■□□□□ 0.48
LRFN4Q6PJG9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms