Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.47■□□□□ 0.87
CASC4Q6P4E1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CASC4Q6P4E1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CASC4Q6P4E1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CASC4Q6P4E1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CASC4Q6P4E1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CASC4Q6P4E1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CASC4Q6P4E1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.47■□□□□ 0.87
CASC4Q6P4E1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CASC4Q6P4E1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.47■□□□□ 0.87
CASC4Q6P4E1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CASC4Q6P4E1 AC087623.3-201ENST00000607047 1098 ntBASIC20.47■□□□□ 0.87
CASC4Q6P4E1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CASC4Q6P4E1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CASC4Q6P4E1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CASC4Q6P4E1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CASC4Q6P4E1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.47■□□□□ 0.87
CASC4Q6P4E1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CASC4Q6P4E1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CASC4Q6P4E1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.47■□□□□ 0.87
CASC4Q6P4E1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CASC4Q6P4E1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CASC4Q6P4E1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.47■□□□□ 0.87
CASC4Q6P4E1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CASC4Q6P4E1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CASC4Q6P4E1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
CASC4Q6P4E1 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CASC4Q6P4E1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.46■□□□□ 0.87
CASC4Q6P4E1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.46■□□□□ 0.87
CASC4Q6P4E1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CASC4Q6P4E1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CASC4Q6P4E1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CASC4Q6P4E1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CASC4Q6P4E1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CASC4Q6P4E1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CASC4Q6P4E1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CASC4Q6P4E1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.46■□□□□ 0.87
CASC4Q6P4E1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CASC4Q6P4E1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.46■□□□□ 0.87
CASC4Q6P4E1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
CASC4Q6P4E1 AL591742.1-201ENST00000604433 565 ntBASIC20.46■□□□□ 0.87
CASC4Q6P4E1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.46■□□□□ 0.87
CASC4Q6P4E1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
CASC4Q6P4E1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CASC4Q6P4E1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.46■□□□□ 0.87
CASC4Q6P4E1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.46■□□□□ 0.87
CASC4Q6P4E1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CASC4Q6P4E1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CASC4Q6P4E1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CASC4Q6P4E1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.46■□□□□ 0.87
CASC4Q6P4E1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CASC4Q6P4E1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CASC4Q6P4E1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.45■□□□□ 0.86
CASC4Q6P4E1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CASC4Q6P4E1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CASC4Q6P4E1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CASC4Q6P4E1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.45■□□□□ 0.86
CASC4Q6P4E1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.45■□□□□ 0.86
CASC4Q6P4E1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CASC4Q6P4E1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CASC4Q6P4E1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
CASC4Q6P4E1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CASC4Q6P4E1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
CASC4Q6P4E1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.45■□□□□ 0.86
CASC4Q6P4E1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.45■□□□□ 0.86
CASC4Q6P4E1 PGM5P4-201ENST00000421970 445 ntBASIC20.45■□□□□ 0.86
CASC4Q6P4E1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.45■□□□□ 0.86
CASC4Q6P4E1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
CASC4Q6P4E1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.45■□□□□ 0.86
CASC4Q6P4E1 AC137761.2-201ENST00000561729 223 ntBASIC20.45■□□□□ 0.86
CASC4Q6P4E1 AC145350.3-201ENST00000569033 163 ntBASIC20.45■□□□□ 0.86
CASC4Q6P4E1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CASC4Q6P4E1 MIR6821-201ENST00000617625 74 ntBASIC20.45■□□□□ 0.86
CASC4Q6P4E1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CASC4Q6P4E1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CASC4Q6P4E1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
CASC4Q6P4E1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CASC4Q6P4E1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CASC4Q6P4E1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.45■□□□□ 0.86
CASC4Q6P4E1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.45■□□□□ 0.86
CASC4Q6P4E1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CASC4Q6P4E1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CASC4Q6P4E1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.44■□□□□ 0.86
CASC4Q6P4E1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CASC4Q6P4E1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.44■□□□□ 0.86
CASC4Q6P4E1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CASC4Q6P4E1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CASC4Q6P4E1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CASC4Q6P4E1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CASC4Q6P4E1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CASC4Q6P4E1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CASC4Q6P4E1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CASC4Q6P4E1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CASC4Q6P4E1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CASC4Q6P4E1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CASC4Q6P4E1 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.44■□□□□ 0.86
CASC4Q6P4E1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.44■□□□□ 0.86
CASC4Q6P4E1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.44■□□□□ 0.86
CASC4Q6P4E1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.44■□□□□ 0.86
CASC4Q6P4E1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms