Protein–RNA interactions for Protein: Q6P1Q0

LETMD1, LETM1 domain-containing protein 1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1Q6P1Q0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
LETMD1Q6P1Q0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LETMD1Q6P1Q0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LETMD1Q6P1Q0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LETMD1Q6P1Q0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LETMD1Q6P1Q0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LETMD1Q6P1Q0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
LETMD1Q6P1Q0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LETMD1Q6P1Q0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LETMD1Q6P1Q0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.46■□□□□ 0.71
LETMD1Q6P1Q0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LETMD1Q6P1Q0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LETMD1Q6P1Q0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
LETMD1Q6P1Q0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
LETMD1Q6P1Q0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
LETMD1Q6P1Q0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
LETMD1Q6P1Q0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.46■□□□□ 0.71
LETMD1Q6P1Q0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
LETMD1Q6P1Q0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.46■□□□□ 0.71
LETMD1Q6P1Q0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
LETMD1Q6P1Q0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
LETMD1Q6P1Q0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LETMD1Q6P1Q0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LETMD1Q6P1Q0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
LETMD1Q6P1Q0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LETMD1Q6P1Q0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LETMD1Q6P1Q0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LETMD1Q6P1Q0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.46■□□□□ 0.71
LETMD1Q6P1Q0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LETMD1Q6P1Q0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LETMD1Q6P1Q0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LETMD1Q6P1Q0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LETMD1Q6P1Q0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.45■□□□□ 0.7
LETMD1Q6P1Q0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LETMD1Q6P1Q0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LETMD1Q6P1Q0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.45■□□□□ 0.7
LETMD1Q6P1Q0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
LETMD1Q6P1Q0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.45■□□□□ 0.7
LETMD1Q6P1Q0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.45■□□□□ 0.7
LETMD1Q6P1Q0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.45■□□□□ 0.7
LETMD1Q6P1Q0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.45■□□□□ 0.7
LETMD1Q6P1Q0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.45■□□□□ 0.7
LETMD1Q6P1Q0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LETMD1Q6P1Q0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LETMD1Q6P1Q0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.45■□□□□ 0.7
LETMD1Q6P1Q0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LETMD1Q6P1Q0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LETMD1Q6P1Q0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.45■□□□□ 0.7
LETMD1Q6P1Q0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LETMD1Q6P1Q0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.44■□□□□ 0.7
LETMD1Q6P1Q0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.44■□□□□ 0.7
LETMD1Q6P1Q0 PTBP1P-201ENST00000554374 1601 ntBASIC19.44■□□□□ 0.7
LETMD1Q6P1Q0 AL158211.5-201ENST00000623583 2518 ntBASIC19.44■□□□□ 0.7
LETMD1Q6P1Q0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LETMD1Q6P1Q0 MCRIP2P1-201ENST00000394346 511 ntBASIC19.44■□□□□ 0.7
LETMD1Q6P1Q0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.44■□□□□ 0.7
LETMD1Q6P1Q0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.44■□□□□ 0.7
LETMD1Q6P1Q0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.44■□□□□ 0.7
LETMD1Q6P1Q0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LETMD1Q6P1Q0 AC100791.3-201ENST00000617619 330 ntBASIC19.44■□□□□ 0.7
LETMD1Q6P1Q0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LETMD1Q6P1Q0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LETMD1Q6P1Q0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LETMD1Q6P1Q0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LETMD1Q6P1Q0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LETMD1Q6P1Q0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.44■□□□□ 0.7
LETMD1Q6P1Q0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
LETMD1Q6P1Q0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LETMD1Q6P1Q0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.43■□□□□ 0.7
LETMD1Q6P1Q0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LETMD1Q6P1Q0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.43■□□□□ 0.7
LETMD1Q6P1Q0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LETMD1Q6P1Q0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LETMD1Q6P1Q0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LETMD1Q6P1Q0 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LETMD1Q6P1Q0 AL162430.1-201ENST00000480705 870 ntBASIC19.43■□□□□ 0.7
LETMD1Q6P1Q0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
LETMD1Q6P1Q0 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.43■□□□□ 0.7
LETMD1Q6P1Q0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LETMD1Q6P1Q0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
LETMD1Q6P1Q0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LETMD1Q6P1Q0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.43■□□□□ 0.7
LETMD1Q6P1Q0 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.43■□□□□ 0.7
LETMD1Q6P1Q0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
LETMD1Q6P1Q0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LETMD1Q6P1Q0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LETMD1Q6P1Q0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LETMD1Q6P1Q0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LETMD1Q6P1Q0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LETMD1Q6P1Q0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.42■□□□□ 0.7
LETMD1Q6P1Q0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LETMD1Q6P1Q0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LETMD1Q6P1Q0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LETMD1Q6P1Q0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.42■□□□□ 0.7
LETMD1Q6P1Q0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LETMD1Q6P1Q0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
LETMD1Q6P1Q0 CYP2T1P-201ENST00000432607 1285 ntBASIC19.42■□□□□ 0.7
LETMD1Q6P1Q0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LETMD1Q6P1Q0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.42■□□□□ 0.7
LETMD1Q6P1Q0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms