Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
MRPL54Q6P161 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MRPL54Q6P161 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MRPL54Q6P161 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
MRPL54Q6P161 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MRPL54Q6P161 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.2■□□□□ 0.02
MRPL54Q6P161 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MRPL54Q6P161 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.2■□□□□ 0.02
MRPL54Q6P161 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.2■□□□□ 0.02
MRPL54Q6P161 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MRPL54Q6P161 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC15.2■□□□□ 0.02
MRPL54Q6P161 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MRPL54Q6P161 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
MRPL54Q6P161 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MRPL54Q6P161 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.2■□□□□ 0.02
MRPL54Q6P161 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
MRPL54Q6P161 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
MRPL54Q6P161 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MRPL54Q6P161 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MRPL54Q6P161 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MRPL54Q6P161 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.2■□□□□ 0.02
MRPL54Q6P161 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRPL54Q6P161 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
MRPL54Q6P161 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRPL54Q6P161 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRPL54Q6P161 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRPL54Q6P161 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRPL54Q6P161 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MRPL54Q6P161 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MRPL54Q6P161 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
MRPL54Q6P161 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.19■□□□□ 0.02
MRPL54Q6P161 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRPL54Q6P161 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRPL54Q6P161 pRNA.6-201ENST00000610482 90 ntBASIC15.19■□□□□ 0.02
MRPL54Q6P161 pRNA.5-201ENST00000612139 90 ntBASIC15.19■□□□□ 0.02
MRPL54Q6P161 pRNA.11-201ENST00000618423 90 ntBASIC15.19■□□□□ 0.02
MRPL54Q6P161 pRNA.13-201ENST00000619112 90 ntBASIC15.19■□□□□ 0.02
MRPL54Q6P161 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC15.19■□□□□ 0.02
MRPL54Q6P161 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MRPL54Q6P161 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
MRPL54Q6P161 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.19■□□□□ 0.02
MRPL54Q6P161 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MRPL54Q6P161 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.18■□□□□ 0.02
MRPL54Q6P161 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRPL54Q6P161 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRPL54Q6P161 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRPL54Q6P161 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRPL54Q6P161 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRPL54Q6P161 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MRPL54Q6P161 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
MRPL54Q6P161 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
MRPL54Q6P161 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC15.18■□□□□ 0.02
MRPL54Q6P161 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.18■□□□□ 0.02
MRPL54Q6P161 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRPL54Q6P161 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.18■□□□□ 0.02
MRPL54Q6P161 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRPL54Q6P161 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRPL54Q6P161 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
MRPL54Q6P161 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MRPL54Q6P161 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
MRPL54Q6P161 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MRPL54Q6P161 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MRPL54Q6P161 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MRPL54Q6P161 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC15.17■□□□□ 0.02
MRPL54Q6P161 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.17■□□□□ 0.02
MRPL54Q6P161 AC011484.1-201ENST00000377652 1995 ntBASIC15.17■□□□□ 0.02
MRPL54Q6P161 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
MRPL54Q6P161 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.17■□□□□ 0.02
MRPL54Q6P161 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
MRPL54Q6P161 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
MRPL54Q6P161 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC15.17■□□□□ 0.02
MRPL54Q6P161 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
MRPL54Q6P161 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.17■□□□□ 0.02
MRPL54Q6P161 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MRPL54Q6P161 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MRPL54Q6P161 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
MRPL54Q6P161 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MRPL54Q6P161 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
MRPL54Q6P161 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MRPL54Q6P161 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRPL54Q6P161 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
MRPL54Q6P161 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MRPL54Q6P161 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.16■□□□□ 0.02
MRPL54Q6P161 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRPL54Q6P161 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRPL54Q6P161 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC15.16■□□□□ 0.02
MRPL54Q6P161 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC15.16■□□□□ 0.02
MRPL54Q6P161 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRPL54Q6P161 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC15.16■□□□□ 0.02
MRPL54Q6P161 MIR4508-201ENST00000584178 70 ntBASIC15.16■□□□□ 0.02
MRPL54Q6P161 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC15.16■□□□□ 0.02
MRPL54Q6P161 OR6D1P-202ENST00000641007 5290 ntBASIC15.16■□□□□ 0.02
MRPL54Q6P161 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRPL54Q6P161 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRPL54Q6P161 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRPL54Q6P161 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.16■□□□□ 0.02
MRPL54Q6P161 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRPL54Q6P161 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRPL54Q6P161 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
MRPL54Q6P161 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms