Protein–RNA interactions for Protein: Q6IMN6

CAPRIN2, Caprin-2, humanhuman

Known RBP Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN2Q6IMN6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CAPRIN2Q6IMN6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CAPRIN2Q6IMN6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
CAPRIN2Q6IMN6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.29■□□□□ 0.84
CAPRIN2Q6IMN6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CAPRIN2Q6IMN6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CAPRIN2Q6IMN6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CAPRIN2Q6IMN6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CAPRIN2Q6IMN6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CAPRIN2Q6IMN6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CAPRIN2Q6IMN6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CAPRIN2Q6IMN6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CAPRIN2Q6IMN6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CAPRIN2Q6IMN6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CAPRIN2Q6IMN6 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.29■□□□□ 0.84
CAPRIN2Q6IMN6 AL162412.1-201ENST00000567129 965 ntBASIC20.29■□□□□ 0.84
CAPRIN2Q6IMN6 AL591742.1-201ENST00000604433 565 ntBASIC20.29■□□□□ 0.84
CAPRIN2Q6IMN6 AL050303.2-201ENST00000619798 666 ntBASIC20.29■□□□□ 0.84
CAPRIN2Q6IMN6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.29■□□□□ 0.84
CAPRIN2Q6IMN6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CAPRIN2Q6IMN6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CAPRIN2Q6IMN6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CAPRIN2Q6IMN6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CAPRIN2Q6IMN6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CAPRIN2Q6IMN6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CAPRIN2Q6IMN6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.29■□□□□ 0.84
CAPRIN2Q6IMN6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CAPRIN2Q6IMN6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CAPRIN2Q6IMN6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.28■□□□□ 0.84
CAPRIN2Q6IMN6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CAPRIN2Q6IMN6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CAPRIN2Q6IMN6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.28■□□□□ 0.84
CAPRIN2Q6IMN6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.28■□□□□ 0.84
CAPRIN2Q6IMN6 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CAPRIN2Q6IMN6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.28■□□□□ 0.84
CAPRIN2Q6IMN6 ABHD17AP1-201ENST00000358206 933 ntBASIC20.28■□□□□ 0.84
CAPRIN2Q6IMN6 MIR663A-201ENST00000385250 93 ntBASIC20.28■□□□□ 0.84
CAPRIN2Q6IMN6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.28■□□□□ 0.84
CAPRIN2Q6IMN6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CAPRIN2Q6IMN6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.28■□□□□ 0.84
CAPRIN2Q6IMN6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CAPRIN2Q6IMN6 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.28■□□□□ 0.84
CAPRIN2Q6IMN6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.28■□□□□ 0.84
CAPRIN2Q6IMN6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.28■□□□□ 0.84
CAPRIN2Q6IMN6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CAPRIN2Q6IMN6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CAPRIN2Q6IMN6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CAPRIN2Q6IMN6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CAPRIN2Q6IMN6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CAPRIN2Q6IMN6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CAPRIN2Q6IMN6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CAPRIN2Q6IMN6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.27■□□□□ 0.84
CAPRIN2Q6IMN6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.27■□□□□ 0.84
CAPRIN2Q6IMN6 PCDHAC2-203ENST00000615316 3011 ntBASIC20.27■□□□□ 0.84
CAPRIN2Q6IMN6 AC098818.2-201ENST00000564925 2320 ntBASIC20.27■□□□□ 0.84
CAPRIN2Q6IMN6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.27■□□□□ 0.84
CAPRIN2Q6IMN6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CAPRIN2Q6IMN6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CAPRIN2Q6IMN6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CAPRIN2Q6IMN6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CAPRIN2Q6IMN6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CAPRIN2Q6IMN6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.26■□□□□ 0.83
CAPRIN2Q6IMN6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CAPRIN2Q6IMN6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CAPRIN2Q6IMN6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CAPRIN2Q6IMN6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CAPRIN2Q6IMN6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CAPRIN2Q6IMN6 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.26■□□□□ 0.83
CAPRIN2Q6IMN6 AC006970.2-201ENST00000450065 779 ntBASIC20.26■□□□□ 0.83
CAPRIN2Q6IMN6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.26■□□□□ 0.83
CAPRIN2Q6IMN6 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.26■□□□□ 0.83
CAPRIN2Q6IMN6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.26■□□□□ 0.83
CAPRIN2Q6IMN6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CAPRIN2Q6IMN6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CAPRIN2Q6IMN6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CAPRIN2Q6IMN6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CAPRIN2Q6IMN6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CAPRIN2Q6IMN6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CAPRIN2Q6IMN6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.26■□□□□ 0.83
CAPRIN2Q6IMN6 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.26■□□□□ 0.83
CAPRIN2Q6IMN6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CAPRIN2Q6IMN6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CAPRIN2Q6IMN6 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CAPRIN2Q6IMN6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CAPRIN2Q6IMN6 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CAPRIN2Q6IMN6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.25■□□□□ 0.83
CAPRIN2Q6IMN6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CAPRIN2Q6IMN6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.25■□□□□ 0.83
CAPRIN2Q6IMN6 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CAPRIN2Q6IMN6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CAPRIN2Q6IMN6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CAPRIN2Q6IMN6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CAPRIN2Q6IMN6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CAPRIN2Q6IMN6 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
CAPRIN2Q6IMN6 NCF1B-203ENST00000435988 1254 ntBASIC20.25■□□□□ 0.83
CAPRIN2Q6IMN6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.25■□□□□ 0.83
CAPRIN2Q6IMN6 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CAPRIN2Q6IMN6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CAPRIN2Q6IMN6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CAPRIN2Q6IMN6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms