Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF43Q68DV7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF43Q68DV7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF43Q68DV7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF43Q68DV7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.07■□□□□ 0.96
RNF43Q68DV7 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.07■□□□□ 0.96
RNF43Q68DV7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.07■□□□□ 0.96
RNF43Q68DV7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF43Q68DV7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF43Q68DV7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF43Q68DV7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.07■□□□□ 0.96
RNF43Q68DV7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF43Q68DV7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF43Q68DV7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF43Q68DV7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF43Q68DV7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF43Q68DV7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF43Q68DV7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF43Q68DV7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF43Q68DV7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
RNF43Q68DV7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RNF43Q68DV7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
RNF43Q68DV7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF43Q68DV7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
RNF43Q68DV7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF43Q68DV7 AL391422.3-201ENST00000603791 2761 ntBASIC21.06■□□□□ 0.96
RNF43Q68DV7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
RNF43Q68DV7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF43Q68DV7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RNF43Q68DV7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF43Q68DV7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF43Q68DV7 AC128676.1-201ENST00000454392 318 ntBASIC21.06■□□□□ 0.96
RNF43Q68DV7 UNC93B4-201ENST00000505679 747 ntBASIC21.06■□□□□ 0.96
RNF43Q68DV7 AC105020.6-201ENST00000621523 1217 ntBASIC21.06■□□□□ 0.96
RNF43Q68DV7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.06■□□□□ 0.96
RNF43Q68DV7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF43Q68DV7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
RNF43Q68DV7 AC011484.1-201ENST00000377652 1995 ntBASIC21.06■□□□□ 0.96
RNF43Q68DV7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF43Q68DV7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF43Q68DV7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF43Q68DV7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RNF43Q68DV7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF43Q68DV7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF43Q68DV7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF43Q68DV7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF43Q68DV7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF43Q68DV7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF43Q68DV7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF43Q68DV7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF43Q68DV7 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.05■□□□□ 0.96
RNF43Q68DV7 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF43Q68DV7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF43Q68DV7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.05■□□□□ 0.96
RNF43Q68DV7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.05■□□□□ 0.96
RNF43Q68DV7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.05■□□□□ 0.96
RNF43Q68DV7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF43Q68DV7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RNF43Q68DV7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
RNF43Q68DV7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF43Q68DV7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF43Q68DV7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF43Q68DV7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF43Q68DV7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF43Q68DV7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF43Q68DV7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
RNF43Q68DV7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RNF43Q68DV7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF43Q68DV7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF43Q68DV7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF43Q68DV7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RNF43Q68DV7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF43Q68DV7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.04■□□□□ 0.96
RNF43Q68DV7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.04■□□□□ 0.96
RNF43Q68DV7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF43Q68DV7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF43Q68DV7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RNF43Q68DV7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF43Q68DV7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
RNF43Q68DV7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RNF43Q68DV7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF43Q68DV7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF43Q68DV7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF43Q68DV7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
RNF43Q68DV7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF43Q68DV7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF43Q68DV7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF43Q68DV7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.03■□□□□ 0.96
RNF43Q68DV7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
RNF43Q68DV7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF43Q68DV7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF43Q68DV7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF43Q68DV7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF43Q68DV7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF43Q68DV7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF43Q68DV7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RNF43Q68DV7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF43Q68DV7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF43Q68DV7 AL049796.1-201ENST00000565336 1766 ntBASIC21.02■□□□□ 0.96
RNF43Q68DV7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms