Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TTC39AQ5SRH9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
TTC39AQ5SRH9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TTC39AQ5SRH9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
TTC39AQ5SRH9 ABHD17AP6-201ENST00000458502 1044 ntBASIC24.52■■□□□ 1.52
TTC39AQ5SRH9 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC24.52■■□□□ 1.52
TTC39AQ5SRH9 AC120498.8-201ENST00000614275 531 ntBASIC24.52■■□□□ 1.52
TTC39AQ5SRH9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC24.52■■□□□ 1.52
TTC39AQ5SRH9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC24.52■■□□□ 1.52
TTC39AQ5SRH9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TTC39AQ5SRH9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC24.52■■□□□ 1.52
TTC39AQ5SRH9 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC24.52■■□□□ 1.52
TTC39AQ5SRH9 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC24.52■■□□□ 1.52
TTC39AQ5SRH9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
TTC39AQ5SRH9 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
TTC39AQ5SRH9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TTC39AQ5SRH9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC24.51■■□□□ 1.51
TTC39AQ5SRH9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC24.51■■□□□ 1.51
TTC39AQ5SRH9 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TTC39AQ5SRH9 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC24.51■■□□□ 1.51
TTC39AQ5SRH9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC24.51■■□□□ 1.51
TTC39AQ5SRH9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC24.51■■□□□ 1.51
TTC39AQ5SRH9 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
TTC39AQ5SRH9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TTC39AQ5SRH9 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC24.51■■□□□ 1.51
TTC39AQ5SRH9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC24.51■■□□□ 1.51
TTC39AQ5SRH9 HES2-206ENST00000489730 730 ntTSL 2 BASIC24.51■■□□□ 1.51
TTC39AQ5SRH9 AC233263.1-201ENST00000578059 224 ntBASIC24.51■■□□□ 1.51
TTC39AQ5SRH9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC24.51■■□□□ 1.51
TTC39AQ5SRH9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
TTC39AQ5SRH9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
TTC39AQ5SRH9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
TTC39AQ5SRH9 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
TTC39AQ5SRH9 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC24.5■■□□□ 1.51
TTC39AQ5SRH9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
TTC39AQ5SRH9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
TTC39AQ5SRH9 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC24.5■■□□□ 1.51
TTC39AQ5SRH9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TTC39AQ5SRH9 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TTC39AQ5SRH9 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC24.5■■□□□ 1.51
TTC39AQ5SRH9 AC069544.1-201ENST00000609399 999 ntBASIC24.5■■□□□ 1.51
TTC39AQ5SRH9 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
TTC39AQ5SRH9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC24.5■■□□□ 1.51
TTC39AQ5SRH9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
TTC39AQ5SRH9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TTC39AQ5SRH9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC24.49■■□□□ 1.51
TTC39AQ5SRH9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TTC39AQ5SRH9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
TTC39AQ5SRH9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
TTC39AQ5SRH9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
TTC39AQ5SRH9 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TTC39AQ5SRH9 AC098590.1-201ENST00000468126 897 ntBASIC24.49■■□□□ 1.51
TTC39AQ5SRH9 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC24.49■■□□□ 1.51
TTC39AQ5SRH9 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC24.49■■□□□ 1.51
TTC39AQ5SRH9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC24.49■■□□□ 1.51
TTC39AQ5SRH9 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TTC39AQ5SRH9 AL031963.3-201ENST00000606441 850 ntBASIC24.49■■□□□ 1.51
TTC39AQ5SRH9 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC24.49■■□□□ 1.51
TTC39AQ5SRH9 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TTC39AQ5SRH9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TTC39AQ5SRH9 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC24.49■■□□□ 1.51
TTC39AQ5SRH9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TTC39AQ5SRH9 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
TTC39AQ5SRH9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TTC39AQ5SRH9 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TTC39AQ5SRH9 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
TTC39AQ5SRH9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TTC39AQ5SRH9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TTC39AQ5SRH9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
TTC39AQ5SRH9 HLA-G-202ENST00000376815 851 ntBASIC24.48■■□□□ 1.51
TTC39AQ5SRH9 HLA-G-203ENST00000376818 1127 ntBASIC24.48■■□□□ 1.51
TTC39AQ5SRH9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TTC39AQ5SRH9 KRT8P20-201ENST00000423953 1409 ntBASIC24.48■■□□□ 1.51
TTC39AQ5SRH9 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC24.48■■□□□ 1.51
TTC39AQ5SRH9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TTC39AQ5SRH9 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
TTC39AQ5SRH9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC24.48■■□□□ 1.51
TTC39AQ5SRH9 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC24.48■■□□□ 1.51
TTC39AQ5SRH9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC24.48■■□□□ 1.51
TTC39AQ5SRH9 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
TTC39AQ5SRH9 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC24.48■■□□□ 1.51
TTC39AQ5SRH9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TTC39AQ5SRH9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC24.47■■□□□ 1.51
TTC39AQ5SRH9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC24.47■■□□□ 1.51
TTC39AQ5SRH9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TTC39AQ5SRH9 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
TTC39AQ5SRH9 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
TTC39AQ5SRH9 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC24.47■■□□□ 1.51
TTC39AQ5SRH9 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
TTC39AQ5SRH9 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TTC39AQ5SRH9 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
TTC39AQ5SRH9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
TTC39AQ5SRH9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
TTC39AQ5SRH9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC24.47■■□□□ 1.51
TTC39AQ5SRH9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TTC39AQ5SRH9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
TTC39AQ5SRH9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
TTC39AQ5SRH9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TTC39AQ5SRH9 KRT8P17-201ENST00000453110 1448 ntBASIC24.46■■□□□ 1.51
TTC39AQ5SRH9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms