Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRK2Q5S007 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRK2Q5S007 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRK2Q5S007 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRK2Q5S007 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRK2Q5S007 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRK2Q5S007 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
LRRK2Q5S007 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.62■□□□□ 0.41
LRRK2Q5S007 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRK2Q5S007 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRK2Q5S007 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRK2Q5S007 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRK2Q5S007 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.62■□□□□ 0.41
LRRK2Q5S007 AL671277.2-201ENST00000458060 996 ntBASIC17.62■□□□□ 0.41
LRRK2Q5S007 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.62■□□□□ 0.41
LRRK2Q5S007 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRK2Q5S007 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRK2Q5S007 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
LRRK2Q5S007 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.62■□□□□ 0.41
LRRK2Q5S007 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRK2Q5S007 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRK2Q5S007 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRK2Q5S007 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.61■□□□□ 0.41
LRRK2Q5S007 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRK2Q5S007 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRRK2Q5S007 COX11P1-201ENST00000489116 835 ntBASIC17.61■□□□□ 0.41
LRRK2Q5S007 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRK2Q5S007 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.61■□□□□ 0.41
LRRK2Q5S007 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRK2Q5S007 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRK2Q5S007 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.61■□□□□ 0.41
LRRK2Q5S007 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
LRRK2Q5S007 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
LRRK2Q5S007 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRRK2Q5S007 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.61■□□□□ 0.41
LRRK2Q5S007 AC008622.2-201ENST00000617006 1229 ntBASIC17.61■□□□□ 0.41
LRRK2Q5S007 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRRK2Q5S007 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
LRRK2Q5S007 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.6■□□□□ 0.41
LRRK2Q5S007 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.6■□□□□ 0.41
LRRK2Q5S007 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.6■□□□□ 0.41
LRRK2Q5S007 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRK2Q5S007 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRK2Q5S007 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRK2Q5S007 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRK2Q5S007 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRK2Q5S007 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRK2Q5S007 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRK2Q5S007 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
LRRK2Q5S007 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRK2Q5S007 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.6■□□□□ 0.41
LRRK2Q5S007 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
LRRK2Q5S007 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRK2Q5S007 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRK2Q5S007 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRK2Q5S007 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRK2Q5S007 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRK2Q5S007 FSCN1P1-201ENST00000568912 1481 ntBASIC17.59■□□□□ 0.41
LRRK2Q5S007 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRK2Q5S007 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRK2Q5S007 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRK2Q5S007 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRK2Q5S007 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRK2Q5S007 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
LRRK2Q5S007 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRK2Q5S007 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRK2Q5S007 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRK2Q5S007 AC011506.1-201ENST00000474329 610 ntBASIC17.59■□□□□ 0.41
LRRK2Q5S007 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRK2Q5S007 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRK2Q5S007 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRK2Q5S007 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRK2Q5S007 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRK2Q5S007 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.59■□□□□ 0.41
LRRK2Q5S007 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRK2Q5S007 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRK2Q5S007 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.59■□□□□ 0.41
LRRK2Q5S007 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRK2Q5S007 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
LRRK2Q5S007 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRK2Q5S007 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.59■□□□□ 0.41
LRRK2Q5S007 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.59■□□□□ 0.41
LRRK2Q5S007 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRK2Q5S007 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
LRRK2Q5S007 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRK2Q5S007 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.58■□□□□ 0.41
LRRK2Q5S007 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LRRK2Q5S007 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRK2Q5S007 AC097488.1-201ENST00000507834 756 ntBASIC17.58■□□□□ 0.41
LRRK2Q5S007 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.58■□□□□ 0.41
LRRK2Q5S007 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LRRK2Q5S007 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.58■□□□□ 0.41
LRRK2Q5S007 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRK2Q5S007 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRK2Q5S007 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
LRRK2Q5S007 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.58■□□□□ 0.4
LRRK2Q5S007 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
LRRK2Q5S007 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRK2Q5S007 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
LRRK2Q5S007 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms