Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CTC1Q2NKJ3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
CTC1Q2NKJ3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
CTC1Q2NKJ3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CTC1Q2NKJ3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
CTC1Q2NKJ3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CTC1Q2NKJ3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CTC1Q2NKJ3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
CTC1Q2NKJ3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CTC1Q2NKJ3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CTC1Q2NKJ3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.57■■□□□ 1.04
CTC1Q2NKJ3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.57■■□□□ 1.04
CTC1Q2NKJ3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.57■■□□□ 1.04
CTC1Q2NKJ3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CTC1Q2NKJ3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.57■■□□□ 1.04
CTC1Q2NKJ3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTC1Q2NKJ3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CTC1Q2NKJ3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTC1Q2NKJ3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTC1Q2NKJ3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.57■■□□□ 1.04
CTC1Q2NKJ3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.57■■□□□ 1.04
CTC1Q2NKJ3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.57■■□□□ 1.04
CTC1Q2NKJ3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.57■■□□□ 1.04
CTC1Q2NKJ3 AL049597.2-201ENST00000565575 961 ntBASIC21.57■■□□□ 1.04
CTC1Q2NKJ3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.57■■□□□ 1.04
CTC1Q2NKJ3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.57■■□□□ 1.04
CTC1Q2NKJ3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CTC1Q2NKJ3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CTC1Q2NKJ3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTC1Q2NKJ3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CTC1Q2NKJ3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CTC1Q2NKJ3 AC026471.6-201ENST00000622954 1905 ntBASIC21.57■■□□□ 1.04
CTC1Q2NKJ3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CTC1Q2NKJ3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.56■■□□□ 1.04
CTC1Q2NKJ3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTC1Q2NKJ3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.56■■□□□ 1.04
CTC1Q2NKJ3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTC1Q2NKJ3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTC1Q2NKJ3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.56■■□□□ 1.04
CTC1Q2NKJ3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CTC1Q2NKJ3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CTC1Q2NKJ3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTC1Q2NKJ3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CTC1Q2NKJ3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTC1Q2NKJ3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CTC1Q2NKJ3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.56■■□□□ 1.04
CTC1Q2NKJ3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.56■■□□□ 1.04
CTC1Q2NKJ3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.56■■□□□ 1.04
CTC1Q2NKJ3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CTC1Q2NKJ3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CTC1Q2NKJ3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CTC1Q2NKJ3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.56■■□□□ 1.04
CTC1Q2NKJ3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CTC1Q2NKJ3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTC1Q2NKJ3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.55■■□□□ 1.04
CTC1Q2NKJ3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTC1Q2NKJ3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTC1Q2NKJ3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTC1Q2NKJ3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.55■■□□□ 1.04
CTC1Q2NKJ3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.55■■□□□ 1.04
CTC1Q2NKJ3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CTC1Q2NKJ3 AC145285.6-201ENST00000604632 637 ntBASIC21.55■■□□□ 1.04
CTC1Q2NKJ3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.55■■□□□ 1.04
CTC1Q2NKJ3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.55■■□□□ 1.04
CTC1Q2NKJ3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTC1Q2NKJ3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTC1Q2NKJ3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CTC1Q2NKJ3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CTC1Q2NKJ3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CTC1Q2NKJ3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CTC1Q2NKJ3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CTC1Q2NKJ3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CTC1Q2NKJ3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CTC1Q2NKJ3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CTC1Q2NKJ3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CTC1Q2NKJ3 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.54■■□□□ 1.04
CTC1Q2NKJ3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.54■■□□□ 1.04
CTC1Q2NKJ3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.54■■□□□ 1.04
CTC1Q2NKJ3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CTC1Q2NKJ3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CTC1Q2NKJ3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.54■■□□□ 1.04
CTC1Q2NKJ3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.54■■□□□ 1.04
CTC1Q2NKJ3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CTC1Q2NKJ3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CTC1Q2NKJ3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CTC1Q2NKJ3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CTC1Q2NKJ3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTC1Q2NKJ3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.53■■□□□ 1.04
CTC1Q2NKJ3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.53■■□□□ 1.04
CTC1Q2NKJ3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTC1Q2NKJ3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CTC1Q2NKJ3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CTC1Q2NKJ3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTC1Q2NKJ3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTC1Q2NKJ3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CTC1Q2NKJ3 AL355355.2-201ENST00000442321 338 ntBASIC21.53■■□□□ 1.04
CTC1Q2NKJ3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.53■■□□□ 1.04
CTC1Q2NKJ3 AF186192.3-201ENST00000583427 947 ntBASIC21.53■■□□□ 1.04
CTC1Q2NKJ3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.53■■□□□ 1.04
CTC1Q2NKJ3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms